hypothetical_protein_pdul_cds_684

Euk-Vir

Pandoravirus_dulcis

hypothetical_protein_pdul_cds_684__YP_008319504__Pandoravirus_dulcis__1349409

Identity

68.7 mean pLDDT

Pandoravirus› Pandoravirus_dulcis

TaxID: 1349409

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 264-396

PDB

Domain cluster: rep: hypothetical_protein_TW95_gp1026__YP_009119995__Pandoravirus_inopinatum__1605721__D192-256_273-350

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2ky6A00	2.40.290.30	Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › Mediator complex subunit 25, ACID domain	0.54	33.0	3.08e-01	94.0%	47.0%
1z1bA01	3.30.160.60	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger	0.54	24.0	3.43e-01	79.7%	94.7%
3ue2A01	3.30.70.330	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain	0.52	25.0	3.02e-01	77.4%	67.0%
2rp4A00	6.10.280.60	Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain	0.52	24.0	3.30e-01	85.0%	84.5%
7u32F02	2.30.30.10	Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral	0.51	19.0	3.13e-01	93.2%	94.1%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3955895	4232.1.1.1 ↗	few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28	0.58	24.0	3.53e-01	70.7%	89.1%
4119116	4232.1.1.0 ↗	few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28	0.52	20.0	2.61e-01	78.9%	60.0%

D2 medium residues 77-188

PDB

Domain cluster: rep: hypothetical_protein_pneo_cds_37__YP_009481647__Pandoravirus_neocaledonia__2107708__D128-226

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2lrmA00	1.10.890.30	Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein	0.54	38.0	4.23e-01	72.3%	95.2%
3zfiA00	1.10.890.40	Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A ›	0.54	40.0	4.29e-01	78.6%	96.8%
4w8pA02	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.53	38.0	3.60e-01	74.1%	74.6%
4it4A02	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.50	35.0	3.87e-01	77.7%	90.1%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3193842	145.1.1.0 ↗	alpha arrays › F-box domain › F-box domain › F-box domain	0.65	45.0	4.36e-01	70.5%	84.0%
3700417	109.4.1.1471 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_IPO5	0.53	47.0	3.24e-01	100.0%	76.7%
3170443	5050.1.1.4 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Nucleoside_tran	0.53	40.0	3.16e-01	78.6%	90.9%
4823856	138.1.1.1 ↗	alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › RFC1	0.51	43.0	3.96e-01	93.8%	100.0%
5068349	5057.1.1.1 ↗	alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb	0.51	35.0	3.49e-01	72.3%	84.2%

D3 medium residues 189-263

PDB