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hypothetical_protein_pdul_cds_741

Euk-Vir

Pandoravirus_dulcis

hypothetical_protein_pdul_cds_741__YP_009430251__Pandoravirus_dulcis__1349409

Identity

Accession:
YP_009430251 ↗
Protein ID:
hypothetical_protein_pdul_cds_741
Kingdom:
euk

Quality

76.9 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_dulcis

TaxID: 1349409

Cluster

View cluster (53 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 79-167
PDB
Domain cluster: rep: hypothetical_protein_pqer_cds_827__YP_009483518__Pandoravirus_quercus__2107709__D88-173
D2 medium residues 283-421
PDB
Domain cluster: rep: hypothetical_protein_psal_cds_894__YP_009430089__Pandoravirus_salinus__1349410__D328-426
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1paqA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.67 52.0 5.03e-01 82.7% 96.9%
3ibvB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.63 56.0 3.46e-01 100.0% 27.3%
4xi0F00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 53.0 4.90e-01 100.0% 84.8%
3as5A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 52.0 4.81e-01 100.0% 82.6%
4kvmA01 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 49.0 3.47e-01 100.0% 30.9%
5tqbB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 49.0 3.83e-01 99.3% 55.7%
4ga6A02 1.20.970.50 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › 0.56 44.0 4.31e-01 84.2% 96.7%
4ozvA00 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.55 47.0 3.69e-01 96.4% 69.7%
4abnA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 49.0 3.98e-01 100.0% 59.9%
2pl2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 48.0 4.41e-01 99.3% 80.9%
5nnpE01 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.55 48.0 3.44e-01 100.0% 31.8%
5fzsA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 35.0 3.87e-01 83.5% 81.3%
2vyiA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 42.0 4.35e-01 84.9% 94.5%
2fo7A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 44.0 4.48e-01 91.4% 96.3%
6fdpA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 41.0 4.31e-01 83.5% 94.2%
2gw1A02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 47.0 3.56e-01 100.0% 43.3%
3sz7A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 42.0 4.11e-01 84.9% 80.1%
2y4tB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 42.0 3.25e-01 84.9% 35.3%
2ff4A02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 40.0 3.68e-01 79.9% 85.7%
7tj4A01 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 39.0 4.18e-01 97.8% 92.5%
4ga0A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 44.0 4.39e-01 95.7% 95.8%
7qihA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 36.0 4.06e-01 97.8% 99.0%
3a11B01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.51 34.0 3.56e-01 88.5% 74.4%
6hftA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 41.0 4.23e-01 87.8% 99.2%
1elwA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 39.0 4.14e-01 82.0% 97.4%
4gywA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 34.0 3.81e-01 74.1% 90.5%
2vm6A00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.50 35.0 3.46e-01 72.7% 68.1%
5l0wB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.50 40.0 4.05e-01 85.6% 96.4%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3260807 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.78 72.0 5.77e-01 100.0% 61.7%
4017980 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.76 69.0 6.42e-01 100.0% 78.9%
4349221 109.3.1.166 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 0.75 69.0 5.86e-01 100.0% 71.1%
4306725 109.3.1.20 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 0.75 70.0 5.57e-01 100.0% 55.8%
3276054 109.4.1.1349 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29011 0.68 61.0 4.05e-01 98.6% 26.6%
3276299 109.3.1.171 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 0.67 59.0 5.70e-01 95.0% 96.8%
4565292 109.4.1.1911 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30136 0.65 59.0 4.98e-01 100.0% 74.9%
3451217 109.4.1.1279 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long, TPR_24 0.65 59.0 3.55e-01 100.0% 15.7%
4028985 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 58.0 4.42e-01 100.0% 57.6%
3288019 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.64 59.0 4.04e-01 100.0% 38.3%
3730189 109.3.1.233 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF7104 0.63 57.0 4.94e-01 100.0% 65.5%
3884525 109.4.1.1524 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_ZFYVE26 0.63 50.0 5.19e-01 84.2% 97.6%
3837388 109.4.1.1365 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2, TPR_24 0.63 50.0 4.99e-01 84.2% 82.9%
3513011 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 56.0 4.98e-01 100.0% 95.1%
3432599 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.62 55.0 4.11e-01 100.0% 40.3%
3166901 109.4.1.72 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C 0.62 52.0 3.74e-01 92.1% 32.9%
3339523 109.4.1.1273 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 0.62 55.0 4.31e-01 100.0% 58.1%
3364209 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.61 55.0 4.81e-01 100.0% 69.8%
3355208 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.61 54.0 3.66e-01 100.0% 27.3%
3994644 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 53.0 3.32e-01 100.0% 16.8%
3409931 109.4.1.72 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C 0.60 49.0 3.58e-01 89.9% 35.2%
3514869 109.4.1.449 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2,TPR_8 0.60 53.0 4.13e-01 100.0% 48.8%
3372661 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.59 53.0 4.71e-01 100.0% 74.1%
3604935 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 53.0 3.63e-01 100.0% 35.8%
3385274 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.59 53.0 4.54e-01 100.0% 64.8%
3299887 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.58 45.0 4.76e-01 82.0% 98.3%
3385167 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.58 39.0 4.29e-01 70.5% 86.4%
3469557 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.57 51.0 4.56e-01 100.0% 75.5%
5052968 109.4.1.192 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.56 49.0 3.79e-01 100.0% 45.8%
3701880 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 46.0 4.27e-01 90.6% 86.5%
3647566 109.54.1.3 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp13 0.55 43.0 3.97e-01 99.3% 63.8%
5048415 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 45.0 4.61e-01 93.5% 96.3%
3341289 109.4.1.2315 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP72, TPR_6, SRP_TPR_like 0.53 47.0 3.17e-01 97.8% 32.0%
3818350 109.4.1.210 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 0.53 46.0 3.82e-01 98.6% 61.9%
3877437 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 41.0 3.67e-01 82.7% 60.5%
3980903 109.4.1.210 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 0.51 40.0 4.29e-01 99.3% 100.0%
D3 medium residues 422-503
PDB