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hypothetical_protein_pdul_cds_747

Euk-Vir

Pandoravirus_dulcis

hypothetical_protein_pdul_cds_747__YP_008319594__Pandoravirus_dulcis__1349409

Identity

Accession:
YP_008319594 ↗
Protein ID:
hypothetical_protein_pdul_cds_747
Kingdom:
euk

Quality

84.4 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_dulcis

TaxID: 1349409

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-56
PDB
Domain cluster: rep: hypothetical_protein_pqer_cds_825__YP_009483516__Pandoravirus_quercus__2107709__D1-55
D2 medium residues 57-215
PDB
Domain cluster: rep: ankyrin_repeat_protein__YP_009119491__Pandoravirus_inopinatum__1605721__D219-359
D3 medium residues 216-306
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d7iB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.73 57.0 5.56e-01 82.4% 100.0%
2i2xB01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.72 54.0 5.25e-01 79.1% 85.0%
1qsaA01 1.25.20.10 Mainly Alpha › Alpha Horseshoe › 70-kda Soluble Lytic Transglycosylase; domain 1 › Bacterial muramidases 0.71 64.0 4.24e-01 100.0% 31.1%
2uubT00 1.20.58.110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 0.70 48.0 4.74e-01 71.4% 79.8%
4n5qA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.70 58.0 4.24e-01 91.2% 42.2%
3bgeA01 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.65 49.0 4.87e-01 79.1% 76.0%
3hqiA02 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.65 49.0 4.26e-01 93.4% 52.1%
4g26A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.65 57.0 3.98e-01 97.8% 45.3%
2qw6D00 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.65 45.0 4.65e-01 72.5% 75.6%
1xd4A04 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.64 52.0 3.95e-01 87.9% 60.6%
2i6hA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 45.0 4.45e-01 74.7% 75.0%
3pubA01 1.10.10.2400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain 0.63 48.0 5.23e-01 81.3% 100.0%
5z2mB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.62 56.0 4.92e-01 100.0% 90.5%
3c5wA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.62 53.0 4.13e-01 100.0% 46.1%
2i9cA01 1.25.40.70 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) 0.61 47.0 4.47e-01 84.6% 75.7%
2pqrA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 48.0 4.86e-01 94.5% 87.1%
2or0B01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.59 48.0 4.42e-01 91.2% 84.7%
6t0bf00 1.25.40.40 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI 0.59 52.0 5.02e-01 100.0% 92.2%
2b6cA02 1.25.40.290 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains 0.59 51.0 5.06e-01 100.0% 96.9%
4gytA00 1.20.120.740 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YgfB uncharacterised protein family PF03695 0.56 45.0 3.67e-01 87.9% 79.1%
2kc7A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 48.0 4.76e-01 100.0% 93.9%
7fhyB01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.56 47.0 3.45e-01 98.9% 65.6%
1kblA04 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.53 43.0 2.97e-01 90.1% 62.0%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3721012 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.75 63.0 3.84e-01 89.0% 17.1%
3328100 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.74 60.0 3.93e-01 86.8% 22.7%
3273624 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.73 59.0 5.57e-01 87.9% 80.0%
3673084 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.72 65.0 5.16e-01 100.0% 69.2%
3331058 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.72 61.0 4.00e-01 93.4% 21.8%
3606098 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 54.0 4.79e-01 80.2% 61.5%
3175975 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.71 64.0 4.18e-01 100.0% 47.0%
3347747 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.71 64.0 4.32e-01 100.0% 28.2%
3323041 109.4.1.1335 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, E_motif 0.69 58.0 4.24e-01 100.0% 34.6%
3684540 109.4.1.1257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.68 61.0 4.64e-01 100.0% 44.2%
3829733 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.68 60.0 3.60e-01 100.0% 14.1%
3445962 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.68 61.0 5.75e-01 100.0% 87.3%
3341298 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 59.0 5.03e-01 100.0% 60.0%
3328963 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.67 59.0 4.74e-01 98.9% 71.1%
3356441 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.67 59.0 4.80e-01 100.0% 52.6%
3379149 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.66 55.0 5.35e-01 100.0% 83.0%
3447139 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.66 56.0 4.98e-01 100.0% 65.4%
3381409 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.66 58.0 4.60e-01 98.9% 60.8%
3171906 109.4.1.22 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N 0.66 57.0 4.50e-01 100.0% 56.1%
3420679 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.66 55.0 5.41e-01 100.0% 85.0%
3902216 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.65 59.0 4.17e-01 98.9% 44.4%
3306697 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.65 57.0 4.69e-01 98.9% 67.6%
3320964 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.65 57.0 4.73e-01 100.0% 81.2%
3366136 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.65 57.0 5.25e-01 98.9% 91.7%
3824467 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.65 55.0 5.28e-01 100.0% 81.9%
3439698 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 53.0 4.99e-01 100.0% 74.5%
3379554 109.4.1.1767 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, E_motif 0.65 55.0 3.92e-01 100.0% 30.5%
3437191 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.64 53.0 4.99e-01 100.0% 73.7%
3461784 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.63 56.0 4.57e-01 100.0% 67.4%
3719756 109.4.1.621 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3 0.63 55.0 4.14e-01 100.0% 49.6%
3832877 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 55.0 4.83e-01 100.0% 84.3%
3808794 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.62 55.0 4.58e-01 100.0% 56.4%
3809106 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.62 52.0 5.05e-01 100.0% 84.0%
3649300 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.62 51.0 4.86e-01 92.3% 80.0%
3324130 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 53.0 4.43e-01 100.0% 68.2%
3341289 109.4.1.2315 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP72, TPR_6, SRP_TPR_like 0.59 50.0 3.14e-01 100.0% 15.9%
4608543 109.4.1.889 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_M 0.58 49.0 4.30e-01 98.9% 78.7%
3323491 109.4.1.1979 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP72, SRP_TPR_like 0.58 49.0 3.06e-01 97.8% 15.6%
3630643 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 51.0 4.91e-01 100.0% 89.5%
4012986 109.4.1.238 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP_TPR_like 0.55 49.0 4.07e-01 100.0% 56.4%