hypothetical_protein_pdul_cds_835

Euk-Vir

Pandoravirus_dulcis

hypothetical_protein_pdul_cds_835__YP_008319715__Pandoravirus_dulcis__1349409

Identity

73.3 mean pLDDT

Pandoravirus› Pandoravirus_dulcis

TaxID: 1349409

View cluster (47 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 400-466_481-496

PDB

Domain cluster: rep: hypothetical_protein_pdul_cds_821__YP_008319697__Pandoravirus_dulcis__1349409__D410-473

D2 medium residues 497-542_568-588

PDB

Domain cluster: representative

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2p6vA00	1.20.120.1110	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › TAFH/NHR1 domain	0.61	51.0	4.57e-01	100.0%	66.0%
3a52A02	1.10.60.40	Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 ›	0.57	38.0	3.61e-01	80.6%	55.3%
3q5dA02	1.20.58.420	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP	0.56	48.0	4.23e-01	94.0%	89.7%
4izzB02	1.10.10.1680	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain	0.54	40.0	4.05e-01	79.1%	82.4%
2af7D00	1.20.1290.10	Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like	0.54	40.0	3.28e-01	83.6%	43.8%
4o1pD02	1.10.510.10	Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1	0.53	44.0	3.03e-01	92.5%	47.6%
4fcyA01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.52	43.0	4.15e-01	98.5%	79.5%
3h20A04	1.10.1240.50	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 ›	0.51	41.0	3.79e-01	89.6%	67.4%
2hfiA00	1.20.120.440	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like	0.51	42.0	3.52e-01	94.0%	82.9%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3290009	4107.1.1.1 ↗	alpha arrays › Jann2411-like › Jann2411-like › Jann2411-like › ABATE,zf-CGNR	0.62	57.0	4.17e-01	100.0%	74.7%
3695830	633.24.1.7 ↗	alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › TMD_POM152	0.59	49.0	4.57e-01	91.0%	98.8%
4457423	323.1.1.3 ↗	a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding	0.58	52.0	3.24e-01	97.0%	21.4%
4266291	4003.1.1.1 ↗	alpha arrays › Helical bundle domain in YebC-like proteins › Helical bundle domain in YebC-like proteins › Helical bundle domain in YebC-like proteins › TACO1_YebC_N	0.57	47.0	4.51e-01	92.5%	81.2%
3616872	3718.1.1.17 ↗	alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › PF29069	0.55	50.0	4.16e-01	98.5%	80.9%
3976825	6056.1.1.2 ↗	alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N	0.50	34.0	3.36e-01	71.6%	78.7%
4292146	6056.1.1.2 ↗	alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N	0.50	34.0	3.37e-01	71.6%	81.3%
4043422	6056.1.1.2 ↗	alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N	0.50	34.0	3.34e-01	71.6%	81.3%
4636337	6056.1.1.2 ↗	alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N	0.50	34.0	3.36e-01	71.6%	81.3%

D3 medium residues 589-638

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5yb0J01	3.40.640.10	Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain)	0.55	47.0	3.03e-01	96.0%	72.0%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4433755	109.4.1.1253 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Atp25_C	0.69	60.0	3.76e-01	98.0%	25.8%
3169668	7583.1.1.1 ↗	a/b three-layered sandwiches › Rossmann-like domain in AF1104-like proteins › Rossmann-like domain in AF1104-like proteins › Rossmann-like domain in AF1104-like proteins › ARMT1-like_dom	0.65	58.0	3.48e-01	100.0%	28.2%