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hypothetical_protein_pdul_cds_859
Euk-VirPandoravirus_dulcis
hypothetical_protein_pdul_cds_859__YP_008319746__Pandoravirus_dulcis__1349409
Identity
- Accession:
- YP_008319746 ↗
- Protein ID:
- hypothetical_protein_pdul_cds_859
- Kingdom:
- euk
Quality
68.6
mean pLDDT
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 247-390
Domain cluster:
rep: hypothetical_protein_TW95_gp1026__YP_009119995__Pandoravirus_inopinatum__1605721__D192-256_273-350
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ushA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 23.0 | 2.69e-01 | 75.7% | 49.5% |
| 5akpA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 35.0 | 3.71e-01 | 92.4% | 79.1% |
| 4xpmB00 | 3.40.1840.10 | Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like | 0.51 | 25.0 | 3.50e-01 | 71.5% | 100.0% |
| 5fl3A01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 30.0 | 3.53e-01 | 72.2% | 85.0% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4997522 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.69 | 29.0 | 3.78e-01 | 77.1% | 68.8% |
| 3164555 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 32.0 | 3.21e-01 | 79.9% | 49.3% |
| 4491822 | 312.1.1.5 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › GalP_UDP_tr_C | 0.50 | 34.0 | 3.03e-01 | 96.5% | 46.3% |
D2
medium
residues 140-191
Domain cluster:
representative
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4002714 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.70 | 47.0 | 4.11e-01 | 100.0% | 46.7% |
| 4337429 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.63 | 48.0 | 2.74e-01 | 82.7% | 8.0% |