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hypothetical_protein_pdul_cds_859

Euk-Vir

Pandoravirus_dulcis

hypothetical_protein_pdul_cds_859__YP_008319746__Pandoravirus_dulcis__1349409

Identity

Accession:
YP_008319746 ↗
Protein ID:
hypothetical_protein_pdul_cds_859
Kingdom:
euk

Quality

68.6 mean pLDDT

Taxonomy

TaxID: 1349409

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 247-390
PDB
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ushA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 23.0 2.69e-01 75.7% 49.5%
5akpA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 35.0 3.71e-01 92.4% 79.1%
4xpmB00 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.51 25.0 3.50e-01 71.5% 100.0%
5fl3A01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 30.0 3.53e-01 72.2% 85.0%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4997522 304.12.1.0 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 0.69 29.0 3.78e-01 77.1% 68.8%
3164555 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 32.0 3.21e-01 79.9% 49.3%
4491822 312.1.1.5 a+b three layers › HIT-like › HIT-related › HIT-related › GalP_UDP_tr_C 0.50 34.0 3.03e-01 96.5% 46.3%
D2 medium residues 140-191
PDB
Domain cluster: representative
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4002714 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.70 47.0 4.11e-01 100.0% 46.7%
4337429 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.63 48.0 2.74e-01 82.7% 8.0%