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hypothetical_protein_pdul_cds_868

Euk-Vir

Pandoravirus_dulcis

hypothetical_protein_pdul_cds_868__YP_008319758__Pandoravirus_dulcis__1349409

Identity

Accession:
YP_008319758 ↗
Protein ID:
hypothetical_protein_pdul_cds_868
Kingdom:
euk

Quality

70.8 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_dulcis

TaxID: 1349409

Cluster

View cluster (18 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 133-227
PDB
D2 medium residues 24-124
PDB
Domain cluster: rep: ankyrin_repeat_domain__YP_009430113__Pandoravirus_salinus__1349410__D33-126
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7xceA01 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.60 47.0 3.56e-01 84.2% 61.5%
4ffbC00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.57 49.0 3.89e-01 100.0% 71.0%
4y5jA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.56 48.0 3.86e-01 100.0% 73.6%
3deoA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.56 44.0 3.97e-01 87.1% 92.5%
4g3aB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.55 47.0 3.72e-01 100.0% 80.3%
5cwkA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 47.0 4.08e-01 100.0% 94.0%
6jd6B00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.54 48.0 3.91e-01 100.0% 70.3%
1s70B01 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.53 40.0 3.40e-01 79.2% 63.0%
5cqgA05 1.10.357.90 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Telomerase reverse transcriptase (TERT), thumb domain 0.52 42.0 3.42e-01 87.1% 73.5%
3sz7A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 39.0 3.54e-01 84.2% 81.5%
3b7bB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.52 44.0 3.55e-01 100.0% 63.4%
4lctB00 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 44.0 3.15e-01 100.0% 38.5%
3keaA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.51 44.0 3.31e-01 100.0% 50.2%
3iylB02 1.10.2050.10 Mainly Alpha › Orthogonal Bundle › Protein mu-1, chain B, domain 3 › Protein mu-1, chain B, domain 3 0.51 29.0 2.72e-01 70.3% 41.8%
3d7iB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.50 41.0 4.16e-01 96.0% 91.8%
5cwhA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.50 44.0 3.83e-01 98.0% 93.6%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4014533 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.60 45.0 4.67e-01 87.1% 84.2%
3209933 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.59 52.0 3.77e-01 95.0% 60.2%
3350179 109.4.1.1279 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long, TPR_24 0.56 48.0 3.59e-01 100.0% 45.9%
3338558 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.56 48.0 3.30e-01 100.0% 33.0%
3703251 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 48.0 4.38e-01 100.0% 97.2%
3433717 109.3.1.164 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.55 48.0 3.84e-01 100.0% 68.4%
3339158 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.55 48.0 3.14e-01 99.0% 27.4%
4104964 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.54 46.0 3.96e-01 100.0% 72.6%
3934803 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 48.0 3.45e-01 100.0% 47.3%
4315403 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.53 42.0 3.73e-01 84.2% 74.5%
3220020 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 46.0 3.32e-01 96.0% 34.7%
3264552 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.52 41.0 4.25e-01 85.1% 91.6%
5049352 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.52 33.0 3.33e-01 84.2% 64.0%
3444013 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.51 42.0 3.68e-01 90.1% 80.6%
3324113 109.4.1.1260 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long 0.51 44.0 2.70e-01 100.0% 18.3%
3723163 109.3.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank 0.51 41.0 3.82e-01 88.1% 85.4%
D3 medium residues 250-372
PDB
Domain cluster: rep: ankyrin_repeat_domain__YP_009430093__Pandoravirus_salinus__1349410__D251-372
D4 medium residues 373-475
PDB
Domain cluster: rep: ankyrin_repeat_domain__YP_009430111__Pandoravirus_salinus__1349410__D139-216