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hypothetical_protein_pdul_cds_874
Euk-VirPandoravirus_dulcis
hypothetical_protein_pdul_cds_874__YP_008319764__Pandoravirus_dulcis__1349409
Identity
- Accession:
- YP_008319764 ↗
- Protein ID:
- hypothetical_protein_pdul_cds_874
- Kingdom:
- euk
Quality
73.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-112
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bw2A01 | 3.10.20.420 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bypass-of-forespore C, N-terminal domain | 0.68 | 35.0 | 4.67e-01 | 100.0% | 100.0% |
| 1t0yA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.63 | 45.0 | 4.93e-01 | 100.0% | 91.1% |
| 5c6dA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 45.0 | 4.62e-01 | 100.0% | 83.2% |
| 1wmhA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 43.0 | 4.87e-01 | 98.2% | 100.0% |
| 2kkcA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 49.0 | 5.14e-01 | 100.0% | 99.0% |
| 1l4dB00 | 3.10.20.180 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.58 | 51.0 | 5.15e-01 | 100.0% | 95.5% |
| 3dadA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.58 | 49.0 | 3.49e-01 | 100.0% | 31.5% |
| 2qejD01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.57 | 48.0 | 4.76e-01 | 100.0% | 85.6% |
| 6vtmB00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.57 | 46.0 | 4.93e-01 | 99.1% | 100.0% |
| 6hogA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 42.0 | 4.06e-01 | 100.0% | 69.9% |
| 3i57A01 | 3.10.20.470 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 36.0 | 4.13e-01 | 98.2% | 97.3% |
| 1yn3A00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 45.0 | 4.73e-01 | 98.2% | 100.0% |
| 7ct1A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 40.0 | 4.46e-01 | 97.3% | 100.0% |
| 1wspA00 | 2.40.240.130 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › | 0.55 | 38.0 | 4.34e-01 | 100.0% | 97.6% |
| 1j0gA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 39.0 | 4.19e-01 | 100.0% | 89.1% |
| 5ip4E00 | 3.10.20.230 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Doublecortin domain | 0.54 | 38.0 | 4.25e-01 | 100.0% | 97.6% |
| 2fe3A02 | 3.30.1490.190 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain | 0.54 | 25.0 | 3.29e-01 | 97.3% | 82.5% |
| 5fr6A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 37.0 | 4.11e-01 | 100.0% | 94.0% |
| 3teeA02 | 2.30.30.760 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 30.0 | 3.58e-01 | 100.0% | 83.6% |
| 2x7iA01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.53 | 41.0 | 3.65e-01 | 85.6% | 89.8% |
| 2aehA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 40.0 | 4.31e-01 | 100.0% | 99.0% |
| 1azoA00 | 3.40.600.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › DNA mismatch repair MutH/Restriction endonuclease, type II | 0.51 | 34.0 | 2.87e-01 | 70.3% | 93.0% |
| 3au4A02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 39.0 | 4.23e-01 | 100.0% | 98.9% |
| 2z8lA01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.50 | 44.0 | 4.37e-01 | 99.1% | 91.5% |
| 3go6A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 37.0 | 2.78e-01 | 77.5% | 91.6% |
| 4a55A01 | 3.10.20.770 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.50 | 45.0 | 3.28e-01 | 100.0% | 36.5% |
| 5xbfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 37.0 | 4.13e-01 | 97.3% | 100.0% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3936154 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.66 | 48.0 | 5.26e-01 | 100.0% | 92.2% |
| 3597362 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.65 | 53.0 | 5.25e-01 | 100.0% | 83.5% |
| 3671155 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.65 | 43.0 | 5.05e-01 | 99.1% | 96.2% |
| 3268522 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.64 | 49.0 | 4.93e-01 | 100.0% | 80.0% |
| 3711376 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.64 | 46.0 | 4.61e-01 | 100.0% | 72.2% |
| 3740137 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.62 | 46.0 | 4.52e-01 | 100.0% | 71.7% |
| 3176208 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.62 | 46.0 | 4.12e-01 | 100.0% | 56.7% |
| 3707943 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.62 | 46.0 | 4.67e-01 | 100.0% | 79.1% |
| 3728630 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 44.0 | 4.37e-01 | 99.1% | 71.3% |
| 3199686 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.61 | 44.0 | 4.41e-01 | 100.0% | 72.2% |
| 4183760 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.61 | 47.0 | 4.75e-01 | 100.0% | 80.9% |
| 3796322 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.61 | 40.0 | 4.05e-01 | 87.4% | 65.2% |
| 3804004 | 221.1.1.237 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF4371 | 0.61 | 46.0 | 4.97e-01 | 100.0% | 97.8% |
| 3783882 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.61 | 45.0 | 4.01e-01 | 100.0% | 54.4% |
| 3738600 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.61 | 45.0 | 4.34e-01 | 100.0% | 68.8% |
| 3266762 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.61 | 45.0 | 4.61e-01 | 100.0% | 81.9% |
| 3476734 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.60 | 46.0 | 4.84e-01 | 100.0% | 89.0% |
| 3483062 | 221.1.1.116 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_6 | 0.60 | 55.0 | 5.38e-01 | 100.0% | 98.3% |
| 3619873 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.59 | 46.0 | 4.67e-01 | 100.0% | 82.7% |
| 3991647 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 46.0 | 4.42e-01 | 100.0% | 72.0% |
| 3696190 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 54.0 | 5.29e-01 | 99.1% | 99.2% |
| 3358195 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.59 | 45.0 | 4.50e-01 | 100.0% | 77.4% |
| 3217819 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.59 | 45.0 | 4.57e-01 | 100.0% | 80.9% |
| 3191930 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.59 | 46.0 | 4.14e-01 | 100.0% | 60.7% |
| 4064490 | 2484.1.1.26 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi | 0.59 | 50.0 | 3.77e-01 | 93.7% | 78.5% |
| 3701346 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 40.0 | 4.44e-01 | 99.1% | 91.8% |
| 2044966 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.58 | 44.0 | 4.39e-01 | 100.0% | 75.4% |
| 3246292 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 50.0 | 4.82e-01 | 100.0% | 80.8% |
| 3177939 | 221.1.1.51 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_C2 | 0.58 | 42.0 | 4.74e-01 | 100.0% | 100.0% |
| 3786778 | 221.1.1.68 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ATG5_UblA | 0.58 | 47.0 | 4.50e-01 | 100.0% | 73.8% |
| 3407676 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.58 | 44.0 | 4.43e-01 | 100.0% | 78.3% |
| 3610214 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 51.0 | 5.12e-01 | 99.1% | 93.0% |
| 3613343 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.58 | 44.0 | 4.42e-01 | 100.0% | 80.0% |
| 3397596 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 53.0 | 5.16e-01 | 100.0% | 96.7% |
| 3568435 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 52.0 | 5.10e-01 | 100.0% | 91.7% |
| 3778472 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 52.0 | 4.97e-01 | 100.0% | 93.8% |
| 3202665 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 45.0 | 4.83e-01 | 97.3% | 98.9% |
| 3404964 | 221.13.1.0 ↗ | a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain | 0.56 | 46.0 | 4.58e-01 | 100.0% | 83.5% |
| 3168391 | 221.1.1.222 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF30004 | 0.56 | 52.0 | 4.99e-01 | 100.0% | 92.0% |
| 3916918 | 221.1.1.116 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_6 | 0.56 | 50.0 | 5.03e-01 | 100.0% | 96.4% |
| 3789284 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 51.0 | 4.76e-01 | 100.0% | 90.0% |
| 3702708 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 43.0 | 4.65e-01 | 100.0% | 95.8% |
| 3594601 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 43.0 | 4.69e-01 | 100.0% | 98.9% |
| 3533633 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.56 | 51.0 | 5.03e-01 | 100.0% | 94.2% |
| 4867320 | 221.1.1.66 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PIK3CG_ABD | 0.55 | 46.0 | 4.79e-01 | 100.0% | 98.0% |
| 3595012 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 49.0 | 4.87e-01 | 99.1% | 93.0% |
| 3782117 | 211.1.1.12 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Pfk_N | 0.55 | 33.0 | 3.28e-01 | 88.3% | 55.0% |
| 4032377 | 221.1.1.17 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Stap_Strp_tox_C | 0.54 | 46.0 | 4.78e-01 | 100.0% | 97.1% |
| 3795192 | 221.1.1.51 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_C2 | 0.54 | 45.0 | 4.45e-01 | 100.0% | 85.2% |
| 3175790 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 49.0 | 4.81e-01 | 100.0% | 91.7% |
| 3785313 | 221.1.1.95 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Dsc3_N | 0.54 | 43.0 | 4.51e-01 | 99.1% | 95.0% |
| 3218103 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 43.0 | 4.47e-01 | 100.0% | 92.3% |
| 4176501 | 3068.2.1.1 ↗ | a+b complex topology › Flagellar protein FlgA N-terminal domain-like › RNase J C-terminal domain › RNase J C-terminal domain › RNase_J_C | 0.54 | 37.0 | 3.75e-01 | 70.3% | 74.5% |
| 3940885 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 41.0 | 4.33e-01 | 100.0% | 95.0% |
| 3780612 | 221.1.1.9 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd,PIK3CG_ABD | 0.52 | 44.0 | 3.25e-01 | 99.1% | 34.4% |
| 3599673 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 44.0 | 4.26e-01 | 100.0% | 82.4% |
| 3258431 | 221.17.1.2 ↗ | a+b two layers › beta-Grasp › C-terminal wheel domain of Cns1 › C-terminal wheel domain of Cns1 › BCD1 | 0.52 | 45.0 | 3.92e-01 | 100.0% | 62.9% |
| 3916184 | 221.1.1.168 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd, PI3K_p85B | 0.51 | 46.0 | 3.36e-01 | 100.0% | 36.5% |