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hypothetical_protein_pdul_cds_887
Euk-VirPandoravirus_dulcis
hypothetical_protein_pdul_cds_887__YP_008319783__Pandoravirus_dulcis__1349409
Identity
- Accession:
- YP_008319783 ↗
- Protein ID:
- hypothetical_protein_pdul_cds_887
- Kingdom:
- euk
Quality
81.9
mean pLDDT
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-138
Domain cluster:
rep: hypothetical_protein_pmac_cds_749__YP_009481433__Pandoravirus_macleodensis__2107707__D23-114
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bzwF00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.58 | 45.0 | 3.54e-01 | 83.2% | 94.7% |
| 3nutB02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.56 | 39.0 | 3.82e-01 | 71.7% | 89.8% |
| 2nutB04 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.55 | 41.0 | 3.29e-01 | 79.6% | 98.7% |
| 7dryA01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.55 | 41.0 | 3.53e-01 | 79.6% | 74.5% |
| 2ei9A00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.55 | 41.0 | 3.41e-01 | 80.5% | 75.7% |
| 8bveA03 | 2.40.340.10 | Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV | 0.51 | 28.0 | 3.34e-01 | 86.7% | 80.6% |
| 2fd8A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.50 | 35.0 | 2.93e-01 | 70.8% | 82.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4027485 | 10.32.1.28 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Sad1_UNC | 0.56 | 39.0 | 3.44e-01 | 71.7% | 84.7% |
| 5049149 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.56 | 30.0 | 3.68e-01 | 85.0% | 80.8% |
| 3941506 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.55 | 41.0 | 3.01e-01 | 80.5% | 94.9% |
| 5011090 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.53 | 30.0 | 3.47e-01 | 85.8% | 80.0% |
| 4950136 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.53 | 30.0 | 3.53e-01 | 85.8% | 82.7% |
| 4930449 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.52 | 29.0 | 3.51e-01 | 85.0% | 82.7% |
D2
high
residues 142-250