←Back to structures

hypothetical_protein_pdul_cds_892

Euk-Vir

Pandoravirus_dulcis

hypothetical_protein_pdul_cds_892__YP_008319790__Pandoravirus_dulcis__1349409

Identity

Accession:
YP_008319790 ↗
Protein ID:
hypothetical_protein_pdul_cds_892
Kingdom:
euk

Quality

82.1 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_dulcis

TaxID: 1349409

Cluster

View cluster (53 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 420-518
PDB
Domain cluster: rep: hypothetical_protein_pqer_cds_998__YP_009483689__Pandoravirus_quercus__2107709__D415-513
D2 medium residues 81-191
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3t8kA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.67 57.0 4.75e-01 100.0% 54.3%
2katA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 44.0 4.38e-01 90.1% 73.9%
2cqsA04 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.57 49.0 3.49e-01 99.1% 52.2%
3dfuA02 1.10.1040.40 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › 0.56 34.0 3.64e-01 76.6% 68.7%
7fciA01 1.20.1530.20 Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › 0.54 39.0 2.94e-01 76.6% 84.1%
8a3tD01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 45.0 3.20e-01 93.7% 31.3%
3gw4A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 42.0 3.57e-01 95.5% 49.5%
7e9uA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.53 46.0 3.16e-01 100.0% 35.2%
5unhA02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.52 45.0 3.37e-01 93.7% 66.9%
1qqeA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 46.0 3.46e-01 100.0% 42.0%
2pmvA01 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.51 44.0 3.48e-01 100.0% 46.2%
1kt1A03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 39.0 3.58e-01 84.7% 61.4%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4542889 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.83 61.0 4.56e-01 100.0% 33.6%
3695738 109.3.1.232 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_KRIT1 0.76 61.0 4.04e-01 100.0% 23.0%
4019164 109.3.1.218 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_KRIT1 0.76 60.0 5.00e-01 100.0% 49.7%
3266257 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.70 65.0 5.22e-01 100.0% 64.7%
3275803 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.68 62.0 4.05e-01 100.0% 26.1%
3252038 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.66 63.0 5.65e-01 100.0% 82.1%
3883652 109.3.1.100 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+TRP_2+Ank_2 0.63 57.0 4.30e-01 100.0% 43.1%
3264205 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.62 57.0 5.01e-01 100.0% 79.4%
3813958 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.62 53.0 4.56e-01 100.0% 57.8%
3879368 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.61 55.0 4.58e-01 100.0% 57.9%
3754569 109.4.1.484 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HPS3_C 0.60 45.0 4.50e-01 100.0% 78.3%
3667599 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 50.0 4.45e-01 100.0% 65.0%
3201747 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 53.0 3.51e-01 100.0% 35.1%
3660508 109.4.1.1273 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 0.58 46.0 4.19e-01 98.2% 63.3%
3255250 109.24.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 › DHR-2_Lobe_A 0.58 47.0 4.25e-01 91.0% 90.6%
3323223 109.4.1.1271 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 0.57 51.0 3.92e-01 100.0% 54.9%
2447710 109.2.1.37 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Bac_rhamnosid6H 0.56 48.0 3.95e-01 99.1% 73.5%
3324677 109.4.1.1271 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 0.56 49.0 4.29e-01 100.0% 80.0%
3204085 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 44.0 4.09e-01 88.3% 97.9%
3788155 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 43.0 4.01e-01 93.7% 86.9%
3352880 131.2.1.3 ↗ alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like › PolyA_pol_RNAbd 0.51 46.0 3.57e-01 100.0% 54.7%
3733706 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.50 44.0 3.28e-01 100.0% 69.4%
D3 medium residues 192-248
PDB
Domain cluster: rep: hypothetical_protein_TW95_gp1675__YP_009120644__Pandoravirus_inopinatum__1605721__D292-355