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hypothetical_protein_pdul_cds_8

Euk-Vir

Pandoravirus_dulcis

hypothetical_protein_pdul_cds_8__YP_009430165__Pandoravirus_dulcis__1349409

Identity

Accession:: YP_009430165 ↗
Protein ID:: hypothetical_protein_pdul_cds_8
Kingdom:: euk

Quality

72.8 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_dulcis

TaxID: 1349409

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-35_246-355

PDB

Domain cluster: rep: hypothetical_protein_TW95_gp1718__YP_009120687__Pandoravirus_inopinatum__1605721__D170-219_240-288

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF19207.6 best	DUF5879	55.5	7.90e-15	56.7%	18.3%

D2 medium residues 64-121_173-245

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF19207.6 best	DUF5879	86.3	3.30e-24	56.5%	24.5%
PF19207.6	DUF5879	84.8	9.40e-24	45.8%	22.3%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1y96D00	2.30.30.100	Mainly Beta › Roll › SH3 type barrels. ›	0.62	29.0	3.50e-01	90.1%	66.3%
2k75A01	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.52	36.0	3.97e-01	90.8%	90.3%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3328647	4.1.1.219 ↗	beta barrels › SH3 › SH3 › SH3 › LSM12_LSM	0.62	28.0	3.42e-01	84.0%	63.5%
3812180	3257.1.1.1 ↗	a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N	0.59	48.0	3.96e-01	86.3%	49.4%
4521118	2484.1.1.41 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK	0.58	41.0	3.60e-01	73.3%	100.0%
3325367	267.1.1.3 ↗	a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase	0.56	40.0	3.36e-01	72.5%	83.2%
3213121	4184.1.1.0 ↗	beta barrels › MFPT repeat › MFPT repeat › MFPT repeat	0.56	30.0	3.63e-01	93.1%	85.3%
4145192	3180.1.1.0 ↗	a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related	0.51	30.0	3.25e-01	93.9%	67.3%
5012403	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.51	45.0	4.16e-01	100.0%	76.4%
3228242	4210.1.1.1 ↗	a+b two layers › WGR domain › WGR domain › WGR domain › WGR	0.51	36.0	4.08e-01	86.3%	98.0%
3936037	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.51	34.0	3.97e-01	85.5%	100.0%

D3 medium residues 122-172

PDB