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hypothetical_protein_pdul_cds_939

Euk-Vir

Pandoravirus_dulcis

hypothetical_protein_pdul_cds_939__YP_008319856__Pandoravirus_dulcis__1349409

Identity

Accession:: YP_008319856 ↗
Protein ID:: hypothetical_protein_pdul_cds_939
Kingdom:: euk

Quality

67.1 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_dulcis

TaxID: 1349409

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 21-79_114-238

PDB

D2 medium residues 285-385_443-495

PDB

Domain cluster: representative

CATH (14)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1wy6A00	1.25.40.350	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.68	56.0	5.54e-01	90.3%	84.3%
4g26A01	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.65	56.0	4.48e-01	92.2%	57.0%
4me2A00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.64	55.0	5.07e-01	92.2%	77.8%
3sz7A00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.61	44.0	4.46e-01	76.6%	74.8%
3fp3A01	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.60	45.0	4.83e-01	79.9%	90.4%
2fo7A00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.59	47.0	4.94e-01	94.8%	94.9%
2fbnA00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.59	46.0	4.67e-01	82.5%	90.8%
1sz9C00	1.25.40.90	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.58	45.0	4.70e-01	82.5%	92.9%
3cvpA00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.57	49.0	4.05e-01	94.2%	52.7%
1ihgA02	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.57	44.0	4.51e-01	81.2%	90.3%
1w3bB00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.57	50.0	3.79e-01	96.1%	44.8%
4nrhB00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.57	49.0	4.78e-01	94.2%	96.5%
3vtxB00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.56	47.0	4.52e-01	92.2%	85.2%
3as5A01	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.55	47.0	4.49e-01	91.6%	87.6%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3812874	109.4.1.1260 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long	0.68	58.0	5.20e-01	91.6%	66.2%
5022082	109.4.1.195 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_11	0.64	47.0	5.29e-01	82.5%	100.0%
3353429	109.4.1.1277 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24	0.63	57.0	4.98e-01	100.0%	74.9%
3371871	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.62	54.0	5.07e-01	96.1%	77.8%
3372126	109.4.1.1356 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2, PPR_3, PPR_long	0.62	55.0	4.99e-01	100.0%	80.0%
5077588	109.4.1.5 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1	0.60	52.0	4.86e-01	94.8%	77.9%
4986138	109.4.1.5 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1	0.58	50.0	4.28e-01	94.8%	63.5%
5052778	109.4.1.5 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1	0.57	51.0	4.20e-01	100.0%	56.9%
3250693	109.4.1.192 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8	0.57	49.0	4.21e-01	92.2%	60.4%
3654546	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.56	48.0	4.12e-01	99.4%	56.8%
3498218	109.4.1.186 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC3	0.53	46.0	3.27e-01	97.4%	29.6%
3593169	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.53	47.0	3.29e-01	99.4%	62.9%
3459705	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.50	46.0	3.95e-01	100.0%	90.4%

D3 medium residues 496-578

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2km6A00	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.62	40.0	3.82e-01	95.2%	56.2%
4gywA01	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.58	48.0	4.51e-01	92.8%	83.8%
5aioA01	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.52	43.0	3.71e-01	100.0%	58.1%
3u4tB00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.52	43.0	3.19e-01	98.8%	36.2%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3238033	109.40.1.2 ↗	alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › Ctf4_C	0.62	49.0	4.55e-01	88.0%	92.7%

D4 medium residues 767-950

PDB

Domain cluster: rep: hypothetical_protein_pmac_cds_785__YP_009481469__Pandoravirus_macleodensis__2107707__D813-960