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hypothetical_protein_pmac_cds_166

Euk-Vir

Pandoravirus_macleodensis

hypothetical_protein_pmac_cds_166__YP_009480850__Pandoravirus_macleodensis__2107707

Identity

Accession:
YP_009480850 ↗
Protein ID:
hypothetical_protein_pmac_cds_166
Kingdom:
euk

Quality

75.3 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_macleodensis

TaxID: 2107707

Cluster

View cluster (14 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 14-85
PDB
D2 medium residues 357-473
PDB
Domain cluster: rep: hypothetical_protein_pneo_cds_180__YP_009481790__Pandoravirus_neocaledonia__2107708__D360-475
D3 medium residues 474-639
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7oq4Z01 1.20.120.950 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062 0.71 28.0 3.62e-01 75.3% 61.2%
2ra1A03 1.20.58.770 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 26.0 4.15e-01 71.7% 96.8%
2ggfA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.63 46.0 5.07e-01 98.2% 91.2%
2ntxA02 1.20.58.1310 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › PRONE domain, subdomain 2 0.63 35.0 4.30e-01 95.2% 85.4%
2qeuB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.63 33.0 3.66e-01 78.9% 61.7%
3bjdA01 1.10.1240.20 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain 0.62 33.0 4.28e-01 76.5% 94.3%
2kmfA01 1.20.58.810 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 0.59 28.0 3.44e-01 71.7% 69.6%
1hu3A00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 44.0 4.10e-01 99.4% 62.3%
5oklA01 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.58 26.0 3.30e-01 81.3% 67.3%
3oxfA05 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 26.0 3.73e-01 84.3% 92.0%
1juqC00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 44.0 4.65e-01 95.2% 89.3%
1sz9C00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 42.0 4.54e-01 97.6% 92.1%
1wmwB00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.56 40.0 3.28e-01 74.1% 63.9%
5kbwB00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.55 40.0 3.98e-01 74.1% 92.4%
4tkrA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.55 40.0 3.86e-01 73.5% 99.5%
4by6A01 1.25.40.790 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.55 50.0 4.21e-01 100.0% 81.2%
2w3cA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.54 39.0 3.40e-01 93.4% 47.5%
1xrhD01 1.10.1530.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.54 27.0 3.32e-01 80.7% 75.7%
4bmoA00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.52 40.0 3.33e-01 95.8% 45.5%
3ppuB02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 32.0 3.74e-01 86.1% 88.5%
7p5hB03 1.20.1440.230 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain 0.51 27.0 3.56e-01 72.3% 94.4%
4aifA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 37.0 3.95e-01 100.0% 85.4%
3ibvB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.51 46.0 2.93e-01 100.0% 40.1%
2cmrA00 1.20.58.1860 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 36.0 3.45e-01 71.1% 89.6%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3676751 109.4.1.1747 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28518, PF30921, PF30924 0.59 52.0 3.23e-01 95.8% 19.2%
3245018 109.4.1.543 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › efThoc1 0.58 46.0 4.26e-01 98.8% 65.6%
5075584 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.57 45.0 4.42e-01 100.0% 77.7%
3791727 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 53.0 4.58e-01 99.4% 69.6%
3485270 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 51.0 4.32e-01 98.8% 59.3%
4988320 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.55 47.0 3.79e-01 98.8% 48.3%
3710404 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 48.0 3.79e-01 95.8% 59.1%
3891787 109.4.1.219 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TINF2_N 0.54 35.0 3.54e-01 89.2% 63.5%
3697179 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 37.0 2.84e-01 89.2% 30.0%
3793464 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 47.0 3.36e-01 100.0% 32.3%
3830860 109.46.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) 0.53 30.0 3.30e-01 88.6% 66.7%
3530696 109.4.1.942 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NOT1_connector 0.52 43.0 3.92e-01 98.8% 65.9%
3494504 109.4.1.1965 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28295 0.51 46.0 3.70e-01 98.8% 59.4%
3276281 109.4.1.470 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INTS2 0.50 45.0 3.43e-01 100.0% 55.7%