←Back to structures
hypothetical_protein_pmac_cds_17
Euk-VirPandoravirus_macleodensis
hypothetical_protein_pmac_cds_17__YP_009480701__Pandoravirus_macleodensis__2107707
Identity
- Accession:
- YP_009480701 ↗
- Protein ID:
- hypothetical_protein_pmac_cds_17
- Kingdom:
- euk
Quality
60.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-101
D2
high
residues 179-276
D3
high
residues 566-726
Domain cluster:
rep: hypothetical_protein_psal_cds_69__YP_009429953__Pandoravirus_salinus__1349410__D457-567_599-657
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ipuA00 | 3.55.40.10 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › minor pseudopilin epsh domain | 0.58 | 26.0 | 2.84e-01 | 87.0% | 46.7% |
| 4mz2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 34.0 | 3.98e-01 | 88.8% | 96.4% |
| 3u83A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 32.0 | 3.86e-01 | 88.8% | 95.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4004815 | 4.1.1.166 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2314 | 0.56 | 39.0 | 4.43e-01 | 95.7% | 94.3% |
| 4996690 | 4160.1.1.0 ↗ | beta complex topology › Barrel domain in thermophilic metalloproteases (M29) › Barrel domain in thermophilic metalloproteases (M29) › Barrel domain in thermophilic metalloproteases (M29) | 0.55 | 38.0 | 3.44e-01 | 70.2% | 100.0% |
| 3761946 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.55 | 35.0 | 4.09e-01 | 87.6% | 88.7% |
| 3907645 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.52 | 39.0 | 3.80e-01 | 94.4% | 69.7% |
| 3779693 | 11.1.1.143 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Receptor_2B4 | 0.52 | 32.0 | 3.87e-01 | 85.7% | 90.9% |
| 3734891 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.51 | 29.0 | 3.02e-01 | 94.4% | 57.3% |