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hypothetical_protein_pmac_cds_18

Euk-Vir

Pandoravirus_macleodensis

hypothetical_protein_pmac_cds_18__YP_009480702__Pandoravirus_macleodensis__2107707

Identity

Accession:
YP_009480702 ↗
Protein ID:
hypothetical_protein_pmac_cds_18
Kingdom:
euk

Quality

64.4 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_macleodensis

TaxID: 2107707

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 91-189
PDB
Domain cluster: rep: hypothetical_protein_pneo_cds_18__YP_009481628__Pandoravirus_neocaledonia__2107708__D89-187
D2 medium residues 299-362_381-491
PDB
Domain cluster: rep: hypothetical_protein_psal_cds_69__YP_009429953__Pandoravirus_salinus__1349410__D457-567_599-657
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3pe0A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 32.0 4.29e-01 82.9% 93.1%
3edvB01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 32.0 3.65e-01 81.7% 70.6%
3uumA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 31.0 3.75e-01 82.9% 79.5%
4mz2A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 34.0 4.19e-01 84.0% 95.5%
1s35A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 31.0 3.91e-01 81.7% 90.9%
3r4kA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.53 33.0 3.31e-01 96.0% 58.7%
4bfiB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 31.0 3.82e-01 82.3% 90.2%
2pndA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 32.0 3.80e-01 82.3% 88.2%
1ah1A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 32.0 3.63e-01 80.6% 82.2%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3996406 604.6.1.0 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.77 31.0 4.93e-01 78.9% 94.3%
3565729 109.25.1.6 ↗ alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › GAIN_ADGRG2 0.66 32.0 4.41e-01 98.9% 92.9%
3750020 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.61 32.0 4.27e-01 82.9% 88.6%
3861871 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 33.0 4.26e-01 91.4% 94.7%
5020383 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.60 37.0 4.20e-01 95.4% 81.5%
3513988 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.60 33.0 4.05e-01 82.9% 80.8%
3559718 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.59 32.0 4.11e-01 83.4% 86.4%
3522864 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.59 32.0 4.14e-01 82.9% 87.3%
3841680 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.59 34.0 3.98e-01 82.9% 77.7%
2088959 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.59 34.0 4.03e-01 82.3% 82.2%
3895658 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.59 33.0 4.17e-01 82.3% 89.1%
3916962 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.59 32.0 2.42e-01 82.9% 25.8%
3469833 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.59 32.0 3.91e-01 82.3% 80.0%
3761946 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.58 34.0 4.13e-01 82.3% 87.0%
3900969 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.58 34.0 4.16e-01 79.4% 87.8%
3902164 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.58 34.0 4.03e-01 80.0% 81.6%
3579784 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.58 33.0 3.91e-01 82.9% 79.2%
3907645 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.55 39.0 3.92e-01 90.9% 69.7%
4937575 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.55 29.0 3.89e-01 82.3% 97.8%
3906149 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.53 31.0 3.80e-01 84.0% 90.0%
4963729 223.1.1.4 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › IclR 0.53 32.0 3.28e-01 94.9% 59.4%
4531428 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.52 34.0 3.45e-01 81.1% 63.9%
3702758 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 37.0 3.49e-01 73.1% 100.0%