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hypothetical_protein_pmac_cds_25

Euk-Vir

Pandoravirus_macleodensis

hypothetical_protein_pmac_cds_25__YP_009480709__Pandoravirus_macleodensis__2107707

Identity

Accession:
YP_009480709 ↗
Protein ID:
hypothetical_protein_pmac_cds_25
Kingdom:
euk

Quality

71.1 mean pLDDT

Taxonomy

TaxID: 2107707

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 92-124_158-259
PDB
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wdyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.72 67.0 5.17e-01 99.3% 71.6%
3deoA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.67 61.0 5.93e-01 97.0% 98.6%
3b7bB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.67 62.0 5.20e-01 100.0% 74.6%
4rlyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.67 62.0 4.66e-01 100.0% 51.3%
2f8xK00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.66 61.0 5.16e-01 100.0% 89.4%
4bszB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.66 60.0 5.84e-01 99.3% 98.7%
1ihbA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.66 59.0 5.59e-01 95.6% 100.0%
3ehrA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.64 52.0 5.55e-01 91.1% 100.0%
3twqA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.64 58.0 5.47e-01 99.3% 97.0%
1w9cA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.57 51.0 3.93e-01 100.0% 90.3%
7ru9C01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 48.0 3.92e-01 98.5% 77.5%
6i57A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 42.0 4.35e-01 94.1% 96.0%
3u64A00 1.25.40.920 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TRAP transporter T-component 0.51 45.0 3.63e-01 100.0% 66.1%
2vsyA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 43.0 4.23e-01 96.3% 88.7%
6fdpA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.50 40.0 4.15e-01 91.9% 95.8%
2c2lA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.50 41.0 4.21e-01 92.6% 91.7%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3275573 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.75 69.0 4.46e-01 100.0% 29.3%
3252035 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.74 67.0 6.30e-01 97.0% 81.9%
3562944 109.3.1.8 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.73 68.0 4.61e-01 98.5% 37.9%
3267729 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.73 66.0 5.53e-01 97.0% 77.3%
3883931 109.3.1.163 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 0.72 66.0 5.47e-01 97.8% 86.5%
3429083 109.3.1.166 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 0.72 68.0 4.84e-01 100.0% 54.2%
3727156 109.3.1.163 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 0.72 66.0 5.96e-01 98.5% 80.0%
3190075 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.72 65.0 4.77e-01 97.8% 39.4%
3834155 109.3.1.168 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_5 0.72 64.0 5.36e-01 96.3% 76.9%
3925369 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.71 65.0 5.61e-01 96.3% 77.3%
3302126 109.3.1.164 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.71 66.0 5.14e-01 99.3% 76.0%
3384016 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.71 66.0 5.17e-01 100.0% 58.9%
3577938 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.71 66.0 5.19e-01 98.5% 62.7%
3829293 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.71 62.0 5.28e-01 94.8% 69.1%
3625727 109.3.1.162 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.71 66.0 5.81e-01 99.3% 79.5%
3516535 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.71 65.0 4.60e-01 98.5% 51.7%
3274574 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.71 64.0 5.05e-01 98.5% 60.0%
4016313 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.70 64.0 4.87e-01 99.3% 72.9%
4011152 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.70 65.0 5.21e-01 99.3% 69.6%
3801443 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.70 65.0 5.58e-01 98.5% 83.5%
3619592 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.69 64.0 4.93e-01 98.5% 57.2%
4004153 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.69 65.0 4.33e-01 100.0% 35.2%
4046751 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.69 64.0 5.06e-01 100.0% 74.7%
4001210 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.69 63.0 4.98e-01 99.3% 72.2%
4011915 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.69 47.0 4.72e-01 74.8% 67.9%
None 0.68 62.0 4.35e-01 97.0% 35.5%
3616524 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.68 63.0 5.48e-01 98.5% 85.6%
4042478 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.68 63.0 4.14e-01 99.3% 29.1%
4348553 109.3.1.165 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4, Ank_5 0.68 62.0 4.58e-01 98.5% 56.8%
3420339 109.3.1.33 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_3 0.68 61.0 5.51e-01 96.3% 85.6%
3773221 109.3.1.163 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 0.68 63.0 4.77e-01 100.0% 57.7%
3647207 109.3.1.164 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.68 63.0 5.08e-01 100.0% 66.0%
3186320 109.3.1.162 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.68 63.0 5.36e-01 100.0% 83.8%
4018480 109.3.1.163 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 0.68 62.0 5.44e-01 100.0% 94.0%
3723266 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.67 60.0 5.08e-01 94.1% 77.6%
3687351 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.67 61.0 5.12e-01 100.0% 92.0%
3470926 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.66 61.0 4.68e-01 100.0% 68.5%
3370248 109.3.1.162 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.66 60.0 4.18e-01 97.8% 44.5%
3250144 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.66 61.0 4.90e-01 100.0% 76.9%
4016314 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.64 58.0 4.97e-01 100.0% 89.0%
3935341 109.3.1.162 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.64 55.0 5.39e-01 94.8% 85.5%
3225761 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.64 53.0 5.31e-01 93.3% 86.4%
3895445 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.63 54.0 5.53e-01 94.8% 95.4%
3995092 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.63 56.0 4.91e-01 97.0% 94.0%
4425335 109.3.1.8 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.62 53.0 5.35e-01 97.8% 91.1%
3819773 109.4.1.1292 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3 0.60 54.0 3.63e-01 100.0% 36.4%
3666210 109.4.1.1273 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 0.55 49.0 3.14e-01 100.0% 23.9%
3380715 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.54 47.0 3.83e-01 100.0% 55.4%
3245165 5053.1.1.1 alpha complex topology › Clc chloride channel › Clc chloride channel › Clc chloride channel › Voltage_CLC 0.54 43.0 2.99e-01 88.1% 85.0%
4650331 109.4.1.231 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TAtT 0.53 47.0 3.66e-01 98.5% 83.5%
3738962 109.4.1.1329 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NatB_MDM20, PF31234 0.53 46.0 4.01e-01 100.0% 73.8%
3675577 109.4.1.1269 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.53 46.0 4.52e-01 97.8% 88.0%
3458691 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.52 44.0 4.40e-01 97.0% 89.7%
3467518 109.4.1.202 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 0.51 41.0 3.39e-01 89.6% 55.9%
D3 medium residues 366-425
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3deoA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.77 68.0 5.15e-01 100.0% 50.7%
2ouxA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.61 51.0 4.11e-01 98.3% 67.2%
4jgiA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.55 43.0 4.03e-01 88.3% 100.0%
2i6hA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 44.0 3.99e-01 100.0% 75.0%
8fazD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 45.0 3.13e-01 100.0% 35.1%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3491177 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.79 70.0 5.18e-01 100.0% 43.3%
4104964 109.3.1.8 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.78 69.0 4.91e-01 100.0% 40.2%
3904884 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.76 67.0 5.36e-01 100.0% 57.5%
3580206 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.75 67.0 5.12e-01 100.0% 55.6%
3783376 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.75 64.0 4.44e-01 100.0% 55.3%
3810013 145.1.1.3 alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.55 37.0 3.68e-01 75.0% 67.2%
D4 medium residues 426-504
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dk5A02 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.77 53.0 5.57e-01 72.2% 100.0%
1bc0A03 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.75 55.0 5.37e-01 77.2% 89.5%
3ajcA01 1.10.220.30 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain 0.70 62.0 5.70e-01 100.0% 86.5%
2yvyA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.69 61.0 5.25e-01 100.0% 66.4%
8gpvA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.68 60.0 5.15e-01 100.0% 64.3%
1miwA03 1.20.58.560 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 43.0 4.01e-01 73.4% 58.0%
2pusA04 6.10.140.300 Special › Helix non-globular › Helix Hairpins › 0.56 39.0 3.57e-01 73.4% 98.1%
3op2A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.56 48.0 3.49e-01 100.0% 39.9%
2pmqA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.56 47.0 3.50e-01 100.0% 43.2%
2wglA00 1.10.4190.10 Mainly Alpha › Orthogonal Bundle › Urease accessory protein UreF › Urease accessory protein UreF 0.56 39.0 3.00e-01 75.9% 78.9%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4273022 176.1.1.0 alpha arrays › Annexin › Annexin › Annexin 0.71 50.0 5.22e-01 73.4% 100.0%
326759 109.13.1.1 alpha superhelices › Repetitive alpha hairpins › MgtE N-terminal domain-like › MgtE N-terminal domain-like › MgtE_N 0.69 61.0 5.23e-01 100.0% 65.4%
60149 109.13.1.0 alpha superhelices › Repetitive alpha hairpins › MgtE N-terminal domain-like › MgtE N-terminal domain-like 0.69 61.0 5.25e-01 100.0% 66.4%
3960314 608.1.1.1 alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.68 55.0 4.92e-01 89.9% 73.0%
3253211 4033.1.1.5 alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_ox_N 0.54 38.0 3.43e-01 77.2% 77.5%