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hypothetical_protein_pmac_cds_347

Euk-Vir

Pandoravirus_macleodensis

hypothetical_protein_pmac_cds_347__YP_009481031__Pandoravirus_macleodensis__2107707

Identity

Accession:
YP_009481031 ↗
Protein ID:
hypothetical_protein_pmac_cds_347
Kingdom:
euk

Quality

75.3 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_macleodensis

TaxID: 2107707

Cluster

View cluster (39 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 72-246
PDB
Domain cluster: rep: F-box_domain_containing_protein__YP_009480767__Pandoravirus_macleodensis__2107707__D109-271
D2 medium residues 247-351
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3u61D03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.73 31.0 3.34e-01 99.0% 46.2%
1ygmA01 1.10.220.90 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Mistic 0.64 51.0 5.44e-01 91.4% 100.0%
4rngC00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.63 43.0 4.71e-01 77.1% 88.0%
1ca1A01 1.10.575.10 Mainly Alpha › Orthogonal Bundle › P1 Nuclease › P1 Nuclease 0.57 40.0 3.05e-01 72.4% 34.8%
1li5A02 1.20.120.640 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.55 33.0 3.57e-01 71.4% 69.0%
4wpzA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.55 41.0 2.82e-01 79.0% 69.8%
3fbzA01 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 35.0 3.55e-01 85.7% 66.7%
3ma5A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 35.0 3.80e-01 95.2% 78.9%
3ztaA00 1.10.490.130 Mainly Alpha › Orthogonal Bundle › Globin-like › 0.53 44.0 4.10e-01 100.0% 71.9%
3lxzB02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 44.0 4.07e-01 100.0% 73.2%
2chnB03 1.20.58.460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like 0.52 44.0 3.77e-01 97.1% 96.7%
4pqhA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.51 41.0 4.03e-01 100.0% 79.5%
6a3kA00 1.20.120.10 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 0.51 41.0 3.90e-01 90.5% 90.7%
3bgeA01 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.50 36.0 3.82e-01 98.1% 82.3%
2b1eA04 1.20.1280.170 Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 0.50 45.0 4.24e-01 100.0% 84.3%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3219912 109.4.1.121 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mo25 0.65 52.0 3.87e-01 94.3% 33.3%
3881223 3281.1.1.5 ↗ alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M,Oxidored_q5_N 0.62 55.0 3.62e-01 100.0% 27.4%
3518127 109.4.1.1125 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TAF2_C 0.61 45.0 3.24e-01 94.3% 25.9%
3256484 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.59 53.0 3.19e-01 99.0% 15.7%
5050503 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.59 52.0 3.47e-01 100.0% 59.6%
4026406 3896.1.1.0 ↗ alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase 0.58 49.0 4.05e-01 94.3% 53.5%
4046023 622.1.1.1 ↗ alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C 0.58 39.0 4.23e-01 70.5% 81.1%
3772038 109.4.1.414 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MMS19_N 0.58 48.0 3.79e-01 98.1% 42.2%
4024388 5082.1.1.1 ↗ alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux 0.57 49.0 3.86e-01 96.2% 66.7%
3609409 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 47.0 3.45e-01 97.1% 74.5%
3856581 109.4.1.1617 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28174 0.55 47.0 3.06e-01 95.2% 20.7%
3249622 109.4.1.843 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EFR3_ARM 0.55 48.0 2.95e-01 100.0% 19.2%
4626685 109.4.1.81 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF-3c_N 0.55 39.0 2.85e-01 85.7% 25.6%
3374534 3914.1.1.5 ↗ alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › RSN1_7TM+RSN1_TM 0.55 43.0 2.81e-01 84.8% 80.4%
3953781 109.4.1.497 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EccD 0.54 48.0 3.68e-01 100.0% 41.6%
3489353 3758.1.1.43 ↗ alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › TF_AP-2 0.53 39.0 3.73e-01 78.1% 93.6%
4170026 140.1.1.7 ↗ alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2 0.52 37.0 3.44e-01 99.0% 55.7%
3767125 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.52 37.0 2.69e-01 75.2% 59.4%
3882152 601.20.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Apolipophorin-III › Apolipophorin-III 0.52 36.0 3.19e-01 72.4% 80.0%
3936362 192.5.1.21 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › TF_AP-2 0.51 38.0 3.58e-01 78.1% 84.6%
3567414 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.51 41.0 3.79e-01 87.6% 83.7%
4102360 601.17.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Group V grass pollen allergen › Group V grass pollen allergen › Pollen_allerg_2 0.51 41.0 4.00e-01 90.5% 80.8%
3711431 109.4.1.123 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › U3_assoc_6 0.50 43.0 2.67e-01 100.0% 22.7%
3571906 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.50 38.0 2.78e-01 81.0% 64.6%