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hypothetical_protein_pmac_cds_401
Euk-VirPandoravirus_macleodensis
hypothetical_protein_pmac_cds_401__YP_009481085__Pandoravirus_macleodensis__2107707
Identity
- Accession:
- YP_009481085 ↗
- Protein ID:
- hypothetical_protein_pmac_cds_401
- Kingdom:
- euk
Quality
72.3
mean pLDDT
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-100
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 35.0 | 4.23e-01 | 100.0% | 67.7% |
| 1dk8A02 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.61 | 44.0 | 4.70e-01 | 93.8% | 88.2% |
| 3u8vA00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.60 | 42.0 | 4.50e-01 | 90.7% | 86.7% |
| 3f1bA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 43.0 | 3.53e-01 | 76.3% | 84.2% |
| 1f68A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.55 | 38.0 | 3.78e-01 | 71.1% | 70.9% |
| 2d2sA01 | 1.20.58.1210 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain | 0.55 | 37.0 | 3.53e-01 | 70.1% | 63.8% |
| 4nqfA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.53 | 48.0 | 4.21e-01 | 100.0% | 80.0% |
| 3llkA01 | 1.20.120.1960 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › QSOX sulfhydryl oxidase domain | 0.53 | 40.0 | 4.05e-01 | 92.8% | 81.6% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 38.0 | 4.16e-01 | 100.0% | 100.0% |
| 1cpqA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.51 | 44.0 | 4.08e-01 | 100.0% | 84.5% |
| 6fakA02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.50 | 39.0 | 4.22e-01 | 88.7% | 100.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3822906 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.66 | 34.0 | 3.99e-01 | 100.0% | 70.0% |
| 3352882 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.65 | 34.0 | 3.90e-01 | 100.0% | 70.0% |
| 5037141 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.60 | 45.0 | 4.41e-01 | 79.4% | 79.0% |
| 3436215 | 611.3.1.1 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 | 0.59 | 37.0 | 3.22e-01 | 72.2% | 41.4% |
| 3368823 | 4177.2.1.3 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › Inhibitor of kappaB kinase beta dimerization domain › Inhibitor of kappaB kinase beta dimerization domain › SEO_N | 0.58 | 44.0 | 3.28e-01 | 80.4% | 83.6% |
| 4959917 | 109.4.1.207 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 | 0.58 | 46.0 | 2.97e-01 | 87.6% | 18.8% |
| 3581946 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.57 | 41.0 | 3.47e-01 | 74.2% | 67.5% |
| 4456203 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.57 | 47.0 | 3.76e-01 | 96.9% | 88.6% |
| 3929358 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.54 | 37.0 | 3.87e-01 | 79.4% | 76.7% |
| 3957096 | 601.14.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin | 0.54 | 47.0 | 3.88e-01 | 100.0% | 60.5% |
| 4205265 | 6171.1.1.1 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › JHD | 0.53 | 36.0 | 3.37e-01 | 71.1% | 72.8% |
| 3643236 | 633.12.1.18 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › PF26751 | 0.52 | 38.0 | 3.65e-01 | 78.4% | 72.5% |
| 3640213 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.52 | 42.0 | 3.39e-01 | 85.6% | 80.5% |
| 3395295 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 37.0 | 2.76e-01 | 76.3% | 51.1% |
| 3436965 | 3711.1.1.0 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein | 0.51 | 30.0 | 3.11e-01 | 100.0% | 60.0% |