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hypothetical_protein_pmac_cds_410
Euk-VirPandoravirus_macleodensis
hypothetical_protein_pmac_cds_410__YP_009481094__Pandoravirus_macleodensis__2107707
Identity
- Accession:
- YP_009481094 ↗
- Protein ID:
- hypothetical_protein_pmac_cds_410
- Kingdom:
- euk
Quality
77.1
mean pLDDT
Cluster
View cluster (72 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 169-222_248-303
D2
medium
residues 35-67_223-247
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wbiA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.57 | 46.0 | 3.75e-01 | 93.1% | 97.5% |
D3
medium
residues 68-168
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xd3C00 | 3.40.532.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase | 0.71 | 49.0 | 3.74e-01 | 70.3% | 91.6% |
| 1yzbA01 | 3.90.70.40 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.69 | 50.0 | 4.68e-01 | 75.2% | 80.6% |
| 6hgcA01 | 3.40.532.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase | 0.66 | 46.0 | 3.74e-01 | 72.3% | 94.8% |
| 2el8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.59 | 38.0 | 3.96e-01 | 92.1% | 71.4% |
| 4fo0A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 41.0 | 3.54e-01 | 80.2% | 87.3% |
| 4osnA00 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.53 | 39.0 | 3.81e-01 | 77.2% | 100.0% |
| 2kcjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 40.0 | 4.00e-01 | 83.2% | 82.4% |
| 2da0A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 39.0 | 3.82e-01 | 93.1% | 72.8% |
| 2jozA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 36.0 | 3.72e-01 | 74.3% | 100.0% |
| 1mixA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 38.0 | 3.98e-01 | 95.0% | 88.2% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3762030 | 219.1.1.14 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin | 0.71 | 60.0 | 5.53e-01 | 90.1% | 83.2% |
| 3360341 | 219.1.1.14 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin | 0.69 | 50.0 | 3.94e-01 | 75.2% | 76.1% |
| 286929 | 219.1.1.14 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin | 0.69 | 50.0 | 4.02e-01 | 75.2% | 86.3% |
| 4029401 | 219.1.1.14 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin | 0.68 | 51.0 | 4.13e-01 | 79.2% | 77.8% |
| 4478971 | 4.1.1.174 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF951 | 0.65 | 38.0 | 4.55e-01 | 79.2% | 89.2% |
| 3826272 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.62 | 46.0 | 3.16e-01 | 78.2% | 88.1% |
| 3453949 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.59 | 44.0 | 3.07e-01 | 78.2% | 89.7% |
| 3995797 | 220.1.1.160 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MADD | 0.59 | 34.0 | 4.08e-01 | 97.0% | 87.7% |
| 3174357 | 4027.1.1.0 ↗ | beta barrels › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit | 0.57 | 29.0 | 3.59e-01 | 77.2% | 85.5% |
| 3469279 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 30.0 | 3.39e-01 | 73.3% | 69.3% |
| 3878495 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.54 | 40.0 | 3.20e-01 | 79.2% | 74.0% |
| 4467867 | 3784.1.1.0 ↗ | a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related | 0.54 | 44.0 | 3.92e-01 | 89.1% | 73.1% |
| 3860723 | 633.23.1.33 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin, GSG-1 | 0.53 | 41.0 | 3.30e-01 | 83.2% | 71.4% |
| 3474098 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 42.0 | 3.80e-01 | 87.1% | 99.3% |
| 3997517 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 31.0 | 3.54e-01 | 95.0% | 82.9% |
| 3368068 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 31.0 | 3.68e-01 | 76.2% | 98.3% |
| 4547683 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 43.0 | 3.94e-01 | 93.1% | 100.0% |
| 3621943 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 40.0 | 3.76e-01 | 97.0% | 66.9% |
| 3928295 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.51 | 43.0 | 3.48e-01 | 93.1% | 73.0% |
| 3890410 | 11.2.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF4550 | 0.51 | 45.0 | 3.88e-01 | 98.0% | 63.7% |