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hypothetical_protein_pmac_cds_559

Euk-Vir

Pandoravirus_macleodensis

hypothetical_protein_pmac_cds_559__YP_009481243__Pandoravirus_macleodensis__2107707

Identity

Accession:
YP_009481243 ↗
Protein ID:
hypothetical_protein_pmac_cds_559
Kingdom:
euk

Quality

67.1 mean pLDDT

Taxonomy

TaxID: 2107707

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 571-634
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3pubA01 1.10.10.2400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain 0.85 69.0 6.55e-01 87.5% 90.5%
2yvyA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.84 63.0 4.99e-01 82.8% 40.8%
5c8aA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.80 64.0 5.98e-01 85.9% 97.4%
2af7D00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.76 68.0 5.52e-01 100.0% 93.4%
3h38A02 1.10.3090.10 Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2 0.73 59.0 3.93e-01 90.6% 24.5%
1vkeB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.73 64.0 5.55e-01 100.0% 78.2%
8gpsA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.70 62.0 5.29e-01 100.0% 61.0%
8gpvA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.70 61.0 4.87e-01 98.4% 51.2%
3hjlA02 1.10.220.30 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain 0.70 58.0 5.00e-01 95.3% 60.4%
2qw6D00 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.70 53.0 4.78e-01 81.2% 89.5%
2zgdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.69 59.0 5.09e-01 93.8% 71.1%
4n5qA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.69 61.0 4.09e-01 100.0% 39.4%
2ouxA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.68 58.0 4.73e-01 100.0% 55.5%
1s70B01 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.67 59.0 4.42e-01 100.0% 46.9%
4evfA01 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.66 53.0 5.20e-01 89.1% 100.0%
4zhbA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.65 57.0 4.90e-01 100.0% 74.0%
7kb2B01 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.65 56.0 4.15e-01 100.0% 44.1%
2j9qB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.65 56.0 3.76e-01 100.0% 38.3%
4leuA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.65 56.0 4.10e-01 100.0% 38.5%
2qk2A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.64 55.0 3.81e-01 100.0% 35.5%
1n00A03 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.63 48.0 4.65e-01 84.4% 93.2%
3h3mA00 1.20.58.380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. 0.62 46.0 4.11e-01 78.1% 86.5%
4malA00 1.20.58.2200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 45.0 4.66e-01 76.6% 83.1%
1kn1B00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.62 45.0 3.52e-01 82.8% 56.5%
3cf6E05 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.61 53.0 3.62e-01 100.0% 50.2%
2ptfB02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.61 44.0 4.66e-01 78.1% 96.5%
2crbA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.61 41.0 3.62e-01 70.3% 68.0%
2nr4A02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.60 43.0 4.47e-01 76.6% 93.1%
2e8gA01 1.20.1440.150 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.60 41.0 3.34e-01 71.9% 75.0%
2i9cA01 1.25.40.70 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) 0.60 50.0 4.28e-01 98.4% 70.3%
2mhkA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 49.0 3.99e-01 93.8% 53.6%
3ecsC01 1.20.120.1070 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain 0.58 45.0 4.02e-01 89.1% 77.0%
3ma5A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 46.0 4.15e-01 87.5% 65.6%
3as5A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 49.0 3.63e-01 100.0% 35.4%
7tj4A01 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.58 45.0 3.71e-01 85.9% 46.7%
3u8vA00 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.57 42.0 3.87e-01 78.1% 79.5%
3iqcA00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.56 42.0 3.43e-01 79.7% 61.3%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.56 42.0 4.02e-01 81.2% 82.7%
2pziA04 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 47.0 3.53e-01 100.0% 36.7%
1w3bB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 48.0 3.03e-01 100.0% 18.2%
2vkjA00 1.20.58.2030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 46.0 3.94e-01 95.3% 77.4%
3sz7A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 47.0 3.64e-01 98.4% 42.4%
4cybD00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.54 37.0 2.83e-01 73.4% 52.0%
1hh8A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 45.0 3.31e-01 98.4% 33.3%
3mzkB03 1.20.58.940 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 41.0 4.02e-01 93.8% 80.0%
2ff4A02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 42.0 3.28e-01 100.0% 40.1%
3dzaA01 1.20.120.1940 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YfdX protein domain 0.52 42.0 3.47e-01 89.1% 82.1%
4rg6A02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 40.0 3.88e-01 89.1% 79.2%
3c2gA02 1.10.10.1630 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sys-1 C-terminal domain-like 0.51 43.0 4.28e-01 100.0% 98.5%
4ye6A02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.51 31.0 3.26e-01 96.9% 65.5%
2wueA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 42.0 2.87e-01 100.0% 40.3%
2l6jA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.50 44.0 3.71e-01 100.0% 62.2%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3406985 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.87 79.0 4.43e-01 100.0% 11.6%
3871571 109.4.1.457 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Urb2 0.83 75.0 4.47e-01 100.0% 18.4%
3898130 109.4.1.457 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Urb2 0.82 74.0 4.34e-01 100.0% 16.0%
3772413 109.4.1.457 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Urb2 0.82 74.0 4.14e-01 100.0% 10.5%
3583218 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.82 74.0 4.04e-01 100.0% 7.8%
3616258 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.77 68.0 3.88e-01 98.4% 11.5%
3255324 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.77 67.0 4.39e-01 98.4% 26.2%
3928250 109.18.1.0 alpha superhelices › Repetitive alpha hairpins 0.76 65.0 4.08e-01 96.9% 22.0%
3387828 531.2.1.2 alpha arrays › Domains of FliG › Middle domain of FliG › Middle domain of FliG › MgtE_N 0.72 60.0 6.17e-01 95.3% 100.0%
3900498 109.4.1.2893 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FANCI_S1-cap, FANCI_S1 0.71 63.0 4.63e-01 100.0% 67.1%
3250143 109.3.1.1 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank 0.71 59.0 3.62e-01 92.2% 16.9%
3361198 109.3.1.188 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF28568 0.71 58.0 4.30e-01 90.6% 42.4%
3032601 109.13.1.1 alpha superhelices › Repetitive alpha hairpins › MgtE N-terminal domain-like › MgtE N-terminal domain-like › MgtE_N 0.70 62.0 5.36e-01 100.0% 64.4%
5019940 109.13.1.1 alpha superhelices › Repetitive alpha hairpins › MgtE N-terminal domain-like › MgtE N-terminal domain-like › MgtE_N 0.70 61.0 5.09e-01 100.0% 55.7%
3488831 109.4.1.70 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID 0.70 60.0 4.71e-01 100.0% 84.1%
3838823 531.2.1.2 alpha arrays › Domains of FliG › Middle domain of FliG › Middle domain of FliG › MgtE_N 0.70 57.0 5.91e-01 93.8% 98.3%
4987609 109.13.1.1 alpha superhelices › Repetitive alpha hairpins › MgtE N-terminal domain-like › MgtE N-terminal domain-like › MgtE_N 0.70 59.0 5.07e-01 100.0% 59.0%
3825757 101.35.1.23 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Ovate 0.70 48.0 4.80e-01 71.9% 86.2%
3289526 109.13.1.1 alpha superhelices › Repetitive alpha hairpins › MgtE N-terminal domain-like › MgtE N-terminal domain-like › MgtE_N 0.70 61.0 5.01e-01 100.0% 53.3%
4959627 109.13.1.1 alpha superhelices › Repetitive alpha hairpins › MgtE N-terminal domain-like › MgtE N-terminal domain-like › MgtE_N 0.69 59.0 4.89e-01 100.0% 61.7%
3969170 109.13.1.1 alpha superhelices › Repetitive alpha hairpins › MgtE N-terminal domain-like › MgtE N-terminal domain-like › MgtE_N 0.69 59.0 5.02e-01 100.0% 85.5%
3032603 109.13.1.1 alpha superhelices › Repetitive alpha hairpins › MgtE N-terminal domain-like › MgtE N-terminal domain-like › MgtE_N 0.68 61.0 4.86e-01 100.0% 53.2%
3600313 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.68 61.0 4.62e-01 100.0% 48.7%
4237259 531.2.1.2 alpha arrays › Domains of FliG › Middle domain of FliG › Middle domain of FliG › MgtE_N 0.68 57.0 5.56e-01 95.3% 90.0%
3971303 531.2.1.1 alpha arrays › Domains of FliG › Middle domain of FliG › Middle domain of FliG › FliG_M 0.68 56.0 5.07e-01 96.9% 66.7%
3900520 109.3.1.164 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.68 60.0 4.40e-01 100.0% 46.9%
3926486 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.67 50.0 4.31e-01 81.2% 50.5%
3189734 109.4.1.70 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID 0.67 58.0 4.55e-01 98.4% 55.7%
4046955 531.2.1.1 alpha arrays › Domains of FliG › Middle domain of FliG › Middle domain of FliG › FliG_M 0.67 57.0 5.08e-01 98.4% 70.5%
4012875 109.8.1.0 alpha superhelices › Repetitive alpha hairpins › Arp2/3 complex 16 KDa subunit ARPC5 › Arp2/3 complex 16 KDa subunit ARPC5 0.67 58.0 5.06e-01 100.0% 73.0%
3483551 176.1.1.0 alpha arrays › Annexin › Annexin › Annexin 0.66 54.0 4.76e-01 90.6% 73.7%
3757627 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.66 55.0 3.52e-01 93.8% 22.5%
3264767 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.65 56.0 4.40e-01 100.0% 52.4%
4070707 176.1.1.0 alpha arrays › Annexin › Annexin › Annexin 0.64 51.0 5.03e-01 89.1% 100.0%
3655823 109.4.1.602 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dor1 0.64 53.0 3.30e-01 100.0% 40.2%
4927476 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 53.0 4.21e-01 100.0% 69.0%
3668830 109.4.1.1277 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 0.63 55.0 3.90e-01 100.0% 35.0%
3339266 109.4.1.189 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.62 55.0 3.99e-01 100.0% 39.5%
4624818 621.1.1.0 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.59 41.0 3.74e-01 73.4% 84.4%
3272907 109.30.1.1 alpha superhelices › Repetitive alpha hairpins › Nucleoporin Nup84/Nup107 › Nucleoporin Nup84/Nup107 › Nup84_Nup100 0.56 47.0 3.33e-01 100.0% 34.5%
3456188 109.7.1.10 alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E › WAV3_C 0.56 41.0 3.94e-01 78.1% 76.0%
3958229 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 47.0 4.10e-01 100.0% 73.3%
3925437 601.33.1.0 alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain 0.55 41.0 3.65e-01 81.2% 63.2%
3961515 109.4.1.45 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BTAD 0.54 44.0 3.19e-01 100.0% 34.5%