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hypothetical_protein_pmac_cds_56
Euk-VirPandoravirus_macleodensis
hypothetical_protein_pmac_cds_56__YP_009480740__Pandoravirus_macleodensis__2107707
Identity
- Accession:
- YP_009480740 ↗
- Protein ID:
- hypothetical_protein_pmac_cds_56
- Kingdom:
- euk
Quality
47.8
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 92-263
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19166.7 best | DUF5848 | 31.6 | 2.00e-07 | 42.4% | 90.6% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mswD01 | 1.10.1320.10 | Mainly Alpha › Orthogonal Bundle › T7 RNA polymerase; domain 1 › DNA-directed RNA polymerase, N-terminal domain | 0.55 | 32.0 | 2.64e-01 | 81.4% | 30.0% |
| 4bemJ00 | 1.20.120.610 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase | 0.50 | 37.0 | 3.69e-01 | 75.6% | 80.1% |
| 1st6A03 | 1.20.120.810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vinculin, Vh2 four-helix bundle | 0.50 | 33.0 | 3.04e-01 | 86.6% | 49.8% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3633595 | 5001.1.1.39 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › RTA1 | 0.66 | 37.0 | 3.08e-01 | 86.6% | 30.5% |
| 3779935 | 604.3.1.14 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › Serinc | 0.59 | 42.0 | 4.41e-01 | 73.3% | 79.4% |
| 3970929 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.56 | 39.0 | 3.20e-01 | 70.3% | 93.8% |
| 5012487 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.55 | 40.0 | 4.36e-01 | 99.4% | 88.3% |
| 5075952 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.55 | 26.0 | 2.98e-01 | 80.2% | 57.0% |
| 3289819 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.54 | 40.0 | 3.51e-01 | 76.2% | 84.5% |
| 3227250 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.53 | 33.0 | 3.54e-01 | 86.6% | 69.3% |
| 5038640 | 3883.1.1.1 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf | 0.53 | 45.0 | 4.48e-01 | 100.0% | 88.0% |
| 3736489 | 611.7.1.12 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Goodbye | 0.51 | 46.0 | 4.41e-01 | 99.4% | 90.0% |
| 3289588 | 150.8.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE | 0.50 | 39.0 | 3.19e-01 | 81.4% | 77.8% |
D2
high
residues 291-441