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hypothetical_protein_pmac_cds_625
Euk-VirPandoravirus_macleodensis
hypothetical_protein_pmac_cds_625__YP_009481309__Pandoravirus_macleodensis__2107707
Identity
- Accession:
- YP_009481309 ↗
- Protein ID:
- hypothetical_protein_pmac_cds_625
- Kingdom:
- euk
Quality
66.5
mean pLDDT
Cluster
View cluster (27 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 147-163_187-305
D2
medium
residues 319-403
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eb8B01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.70 | 36.0 | 4.18e-01 | 78.8% | 68.9% |
| 3f0zA01 | 3.30.310.260 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.67 | 38.0 | 3.50e-01 | 83.5% | 42.9% |
| 2vt8A00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.57 | 50.0 | 4.16e-01 | 95.3% | 60.1% |
| 3tdgA01 | 3.10.450.520 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 40.0 | 4.47e-01 | 87.1% | 98.5% |
| 1cc1L00 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.54 | 41.0 | 2.61e-01 | 82.4% | 80.1% |
| 2krtA01 | 3.10.450.270 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 38.0 | 3.58e-01 | 72.9% | 88.3% |
| 3wa2X01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 41.0 | 4.16e-01 | 83.5% | 83.9% |
| 3l24B02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.53 | 42.0 | 3.15e-01 | 91.8% | 80.0% |
| 3biqA02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.53 | 45.0 | 3.25e-01 | 100.0% | 89.8% |
| 4jocA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.52 | 42.0 | 2.76e-01 | 87.1% | 71.9% |
| 1z94B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 45.0 | 3.83e-01 | 100.0% | 68.5% |
| 3cwxA00 | 3.40.1420.20 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD | 0.51 | 40.0 | 3.59e-01 | 88.2% | 94.4% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3169357 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.69 | 50.0 | 4.61e-01 | 83.5% | 59.1% |
| 3513651 | 331.9.1.8 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 | 0.60 | 41.0 | 3.77e-01 | 82.4% | 54.5% |
| 5007358 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.59 | 54.0 | 4.68e-01 | 100.0% | 71.3% |
| 4928736 | 331.19.1.0 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains | 0.58 | 50.0 | 4.18e-01 | 92.9% | 74.3% |
| 4161633 | 283.1.1.3 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Pantoate_ligase | 0.57 | 40.0 | 3.81e-01 | 72.9% | 67.0% |
| 4033743 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.55 | 40.0 | 4.04e-01 | 83.5% | 77.6% |
| 4033339 | 520.1.1.2 ↗ | beta sandwiches › gp9 N-terminal domain-like › gp9 N-terminal domain-related › gp9 N-terminal domain-related › PF27308 | 0.55 | 40.0 | 4.10e-01 | 78.8% | 78.8% |
| 4031359 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.54 | 41.0 | 4.15e-01 | 83.5% | 82.4% |
| 5034929 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.53 | 39.0 | 2.87e-01 | 76.5% | 61.7% |
| 3172630 | 4026.1.1.2 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Bud3_N | 0.52 | 43.0 | 3.30e-01 | 90.6% | 79.5% |
| 3474880 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.51 | 40.0 | 3.92e-01 | 82.4% | 78.9% |
| 3453488 | 243.5.1.1 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › Cu_amine_oxidN2 | 0.50 | 39.0 | 3.74e-01 | 83.5% | 83.0% |
| 4955729 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.50 | 39.0 | 3.10e-01 | 82.4% | 68.2% |
D3
medium
residues 529-615_751-786
D4
medium
residues 616-677_692-750