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hypothetical_protein_pmac_cds_643
Euk-VirPandoravirus_macleodensis
hypothetical_protein_pmac_cds_643__YP_009481327__Pandoravirus_macleodensis__2107707
Identity
- Accession:
- YP_009481327 ↗
- Protein ID:
- hypothetical_protein_pmac_cds_643
- Kingdom:
- euk
Quality
71.3
mean pLDDT
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 264-384
D2
medium
residues 15-170_187-223
D3
medium
residues 385-482
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rmqA02 | 6.10.140.1650 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 35.0 | 4.36e-01 | 85.7% | 98.2% |
| 3lsjA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 45.0 | 3.93e-01 | 84.7% | 70.6% |
| 7t2rC01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.55 | 33.0 | 3.86e-01 | 84.7% | 98.2% |
| 2ip6A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.54 | 33.0 | 3.55e-01 | 81.6% | 70.1% |
| 2vx7A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 43.0 | 2.95e-01 | 93.9% | 37.6% |
| 1mivA02 | 1.10.110.30 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › | 0.51 | 41.0 | 4.15e-01 | 100.0% | 89.6% |
| 1psyA01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.51 | 39.0 | 3.94e-01 | 84.7% | 98.0% |
| 1v7wA03 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.51 | 44.0 | 2.98e-01 | 99.0% | 47.3% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3595699 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 49.0 | 3.75e-01 | 91.8% | 62.2% |
| 4564281 | 109.4.1.1253 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Atp25_C | 0.56 | 49.0 | 3.49e-01 | 100.0% | 31.0% |
| 3613790 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 47.0 | 2.76e-01 | 94.9% | 13.0% |
| 4934060 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.54 | 37.0 | 2.40e-01 | 71.4% | 30.6% |
| 4671536 | 3718.1.1.1 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › FliT | 0.54 | 39.0 | 4.01e-01 | 76.5% | 80.0% |
| 3520685 | 109.4.1.576 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exportin-5 | 0.54 | 46.0 | 3.23e-01 | 100.0% | 77.2% |
| 3579153 | 150.1.1.4 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › COQ7 | 0.54 | 40.0 | 4.18e-01 | 80.6% | 86.7% |
| 5051852 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.53 | 41.0 | 3.04e-01 | 82.7% | 80.7% |
| 3175450 | 109.4.1.1694 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28753, PF28771 | 0.52 | 42.0 | 3.20e-01 | 100.0% | 34.2% |
| 169462 | 3069.1.1.1 ↗ | alpha arrays › BART › BART › BART › ARL2_Bind_BART | 0.52 | 36.0 | 3.31e-01 | 72.4% | 71.3% |
| 3246986 | 109.5.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › adenylylcyclase associated protein, CAP-N › adenylylcyclase associated protein, CAP-N › CAP_N | 0.51 | 41.0 | 3.46e-01 | 87.8% | 56.6% |
| 3996299 | 109.5.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › adenylylcyclase associated protein, CAP-N › adenylylcyclase associated protein, CAP-N › CAP_N | 0.51 | 37.0 | 3.38e-01 | 77.6% | 55.6% |
| 3742888 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 44.0 | 3.39e-01 | 100.0% | 55.6% |
D4
medium
residues 483-614