←Back to structures

hypothetical_protein_pmac_cds_64

Euk-Vir

Pandoravirus_macleodensis

hypothetical_protein_pmac_cds_64__YP_009480748__Pandoravirus_macleodensis__2107707

Identity

Accession:
YP_009480748 ↗
Protein ID:
hypothetical_protein_pmac_cds_64
Kingdom:
euk

Quality

72.6 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_macleodensis

TaxID: 2107707

Cluster

View cluster (47 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 14-93
PDB
Domain cluster: rep: F-box_incomplete_domain_containing_protein__YP_008318724__Pandoravirus_dulcis__1349409__D16-76
D2 medium residues 94-184_200-249
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5m9dA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.68 52.0 5.29e-01 81.6% 96.4%
1juqC00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.67 51.0 5.03e-01 79.4% 91.3%
1x5bA01 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.65 49.0 5.03e-01 80.1% 98.5%
3fgaB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.64 58.0 4.21e-01 100.0% 51.1%
4leuA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 53.0 4.91e-01 95.0% 71.4%
5z62E00 1.25.40.40 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI 0.62 45.0 5.00e-01 75.2% 100.0%
1wy6A00 1.25.40.350 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.61 50.0 4.81e-01 92.9% 76.7%
4me2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 52.0 4.69e-01 99.3% 78.4%
7zcvA02 1.25.40.400 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 47.0 4.17e-01 89.4% 79.0%
1gw5A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.57 49.0 3.26e-01 95.7% 22.6%
2hr2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 46.0 4.49e-01 86.5% 85.9%
3cllA00 1.20.1080.10 Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. 0.56 42.0 3.55e-01 77.3% 96.7%
8el7B01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.56 50.0 3.77e-01 99.3% 91.4%
4lctB00 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 47.0 3.55e-01 91.5% 38.2%
2qw6D00 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.55 30.0 3.73e-01 70.9% 86.0%
2lahA00 1.25.40.430 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.55 49.0 4.72e-01 98.6% 94.4%
6u3wB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 46.0 3.68e-01 93.6% 50.9%
4i9cA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 44.0 3.82e-01 89.4% 85.5%
3eslA02 1.25.40.930 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.53 37.0 3.99e-01 72.3% 84.9%
6hftA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 40.0 4.24e-01 85.8% 89.8%
2dbaA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 38.0 4.11e-01 84.4% 90.7%
7nazA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 40.0 3.33e-01 95.0% 43.3%
4p3fA00 1.10.3450.40 Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain 0.51 42.0 3.84e-01 90.1% 90.2%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3203926 109.3.1.164 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.77 61.0 4.64e-01 95.7% 37.4%
3419521 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 53.0 5.75e-01 82.3% 94.8%
3189734 109.4.1.70 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID 0.67 54.0 5.48e-01 85.8% 93.6%
3257294 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.67 54.0 4.73e-01 84.4% 59.0%
5017745 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 59.0 4.73e-01 96.5% 63.9%
3645820 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.64 48.0 4.88e-01 83.7% 80.0%
3467619 109.4.1.1156 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif 0.63 49.0 5.29e-01 90.8% 99.1%
3252792 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 56.0 4.75e-01 95.0% 62.2%
3350178 109.4.1.1293 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 0.63 50.0 4.27e-01 92.9% 51.1%
3356411 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.63 46.0 4.20e-01 91.5% 57.3%
3336719 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.62 49.0 4.69e-01 94.3% 72.5%
3683682 109.4.1.1280 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long 0.62 51.0 4.51e-01 95.0% 59.5%
3533387 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.62 52.0 5.04e-01 89.4% 88.7%
3300366 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 51.0 5.03e-01 95.0% 81.3%
3808019 109.4.1.1257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.62 50.0 5.10e-01 92.9% 90.4%
3347296 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.61 51.0 4.37e-01 95.0% 56.0%
3735849 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.61 54.0 4.41e-01 94.3% 52.5%
3659026 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.61 48.0 4.02e-01 89.4% 48.3%
3327833 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.61 51.0 4.60e-01 92.9% 65.1%
3222674 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 51.0 4.66e-01 89.4% 89.2%
3464588 109.4.1.184 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1 0.61 56.0 5.00e-01 100.0% 93.3%
3822569 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.61 46.0 4.89e-01 91.5% 90.4%
3660177 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 42.0 4.36e-01 70.9% 75.6%
3422187 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.61 50.0 4.29e-01 92.2% 55.1%
3326179 109.4.1.775 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 50.0 4.67e-01 94.3% 71.4%
3825248 109.4.1.1292 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3 0.61 50.0 4.38e-01 94.3% 58.6%
3675555 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 54.0 4.69e-01 99.3% 69.5%
3429009 109.4.1.1260 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long 0.60 51.0 3.47e-01 92.9% 25.1%
3462356 109.4.1.1275 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long, TPR_24 0.60 53.0 3.63e-01 96.5% 32.7%
3438034 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.60 48.0 4.50e-01 90.8% 69.1%
3647731 109.4.1.5 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 0.60 45.0 4.36e-01 79.4% 73.8%
3654164 109.4.1.1156 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif 0.59 46.0 4.53e-01 87.2% 76.7%
3668830 109.4.1.1277 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 0.59 47.0 4.24e-01 91.5% 60.0%
3659730 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.59 49.0 4.63e-01 89.4% 85.3%
3372056 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.59 51.0 4.79e-01 95.0% 78.9%
3362915 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.58 51.0 3.58e-01 99.3% 90.5%
3339436 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.58 45.0 4.63e-01 92.2% 88.1%
3658724 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.57 48.0 4.14e-01 91.5% 57.7%
3467321 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 45.0 4.52e-01 89.4% 83.4%
3339158 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.56 50.0 3.50e-01 100.0% 61.1%
4203115 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 44.0 3.65e-01 90.1% 46.2%
3167848 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 43.0 3.60e-01 85.8% 81.6%
3609402 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 44.0 4.03e-01 90.8% 81.5%
3447388 109.4.1.30 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT 0.53 48.0 3.81e-01 100.0% 75.5%
4016217 109.4.1.30 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT 0.53 48.0 3.34e-01 100.0% 43.4%
1115536 109.4.1.1276 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT, HEAT_ATR 0.53 47.0 3.42e-01 100.0% 69.2%
3649000 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.53 46.0 3.63e-01 98.6% 62.2%
3961868 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 43.0 3.64e-01 92.9% 55.3%
D3 medium residues 351-461
PDB
Domain cluster: rep: F-box_domain_protein__YP_009120726__Pandoravirus_inopinatum__1605721__D294-394
D4 medium residues 462-579
PDB
Domain cluster: rep: F-box_domain_protein__YP_009120726__Pandoravirus_inopinatum__1605721__D407-523