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hypothetical_protein_pmac_cds_690
Euk-VirPandoravirus_macleodensis
hypothetical_protein_pmac_cds_690__YP_009481374__Pandoravirus_macleodensis__2107707
Identity
- Accession:
- YP_009481374 ↗
- Protein ID:
- hypothetical_protein_pmac_cds_690
- Kingdom:
- euk
Quality
71.9
mean pLDDT
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 38-243
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19207.6 best | DUF5879 | 159.3 | 1.80e-46 | 98.5% | 70.0% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ndaA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.51 | 28.0 | 3.47e-01 | 78.6% | 84.1% |
| 1wz9A02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.51 | 30.0 | 3.54e-01 | 78.6% | 83.8% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3416606 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.60 | 32.0 | 3.37e-01 | 77.2% | 55.4% |
| 4100839 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.58 | 17.0 | 3.23e-01 | 79.1% | 98.0% |
| 3705072 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.55 | 22.0 | 2.90e-01 | 73.8% | 63.5% |
| 3551012 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.55 | 34.0 | 3.20e-01 | 78.2% | 50.8% |
| 4338934 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.55 | 18.0 | 3.28e-01 | 71.4% | 93.8% |
| 3979564 | 4246.1.1.0 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit | 0.55 | 19.0 | 3.26e-01 | 70.4% | 95.4% |
| 4006488 | 4959.1.1.0 ↗ | a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit | 0.54 | 19.0 | 3.23e-01 | 70.4% | 95.4% |
| 3591183 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 27.0 | 3.59e-01 | 77.7% | 97.1% |
| 5012403 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 35.0 | 3.87e-01 | 97.6% | 87.9% |
D2
medium
residues 297-378