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hypothetical_protein_pmac_cds_743
Euk-VirPandoravirus_macleodensis
hypothetical_protein_pmac_cds_743__YP_009481427__Pandoravirus_macleodensis__2107707
Identity
- Accession:
- YP_009481427 ↗
- Protein ID:
- hypothetical_protein_pmac_cds_743
- Kingdom:
- euk
Quality
73.6
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 199-288
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3sl9B00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.63 | 55.0 | 4.61e-01 | 100.0% | 71.5% |
| 4g26A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 53.0 | 3.75e-01 | 100.0% | 35.7% |
| 3fp3A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 46.0 | 4.09e-01 | 88.9% | 69.6% |
| 3q5wA00 | 1.20.58.1590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tethering factor for nuclear proteasome Cut8/Sts1 | 0.57 | 46.0 | 3.74e-01 | 93.3% | 77.8% |
| 3beeA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 39.0 | 3.95e-01 | 81.1% | 92.3% |
| 2f07B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 44.0 | 3.51e-01 | 100.0% | 85.2% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3253180 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.82 | 72.0 | 5.32e-01 | 93.3% | 56.7% |
| 3268340 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.80 | 69.0 | 6.01e-01 | 94.4% | 96.3% |
| 3248778 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.79 | 69.0 | 4.47e-01 | 93.3% | 32.3% |
| 3273273 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.79 | 60.0 | 4.77e-01 | 80.0% | 48.0% |
| 3260857 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.78 | 69.0 | 5.00e-01 | 96.7% | 57.6% |
| 3274261 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.76 | 68.0 | 5.51e-01 | 96.7% | 72.1% |
| 3264205 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.76 | 69.0 | 5.66e-01 | 100.0% | 87.5% |
| 3254883 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.76 | 66.0 | 4.63e-01 | 96.7% | 51.6% |
| 3259836 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.76 | 66.0 | 5.93e-01 | 96.7% | 93.6% |
| 3257618 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.76 | 69.0 | 5.65e-01 | 100.0% | 70.0% |
| 3265096 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 67.0 | 4.43e-01 | 97.8% | 45.6% |
| 3267790 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.70 | 62.0 | 5.07e-01 | 100.0% | 57.1% |
| 3677966 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.61 | 54.0 | 4.47e-01 | 100.0% | 61.8% |
| 3174076 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.58 | 49.0 | 3.88e-01 | 97.8% | 76.6% |
| 3179883 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.58 | 49.0 | 3.19e-01 | 95.6% | 34.4% |
| 4024904 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 43.0 | 4.02e-01 | 87.8% | 89.6% |
| 3725613 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.55 | 40.0 | 3.90e-01 | 80.0% | 96.2% |
| 5045430 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.54 | 47.0 | 2.87e-01 | 100.0% | 33.4% |
D2
medium
residues 435-514
Domain cluster:
rep: F-box_domain_protein__YP_009119351__Pandoravirus_inopinatum__1605721__D428-494