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hypothetical_protein_pmac_cds_778

Euk-Vir

Pandoravirus_macleodensis

hypothetical_protein_pmac_cds_778__YP_009481462__Pandoravirus_macleodensis__2107707

Identity

Accession:
YP_009481462 ↗
Protein ID:
hypothetical_protein_pmac_cds_778
Kingdom:
euk

Quality

65.9 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_macleodensis

TaxID: 2107707

Cluster

View cluster (47 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 361-473
PDB
Domain cluster: rep: hypothetical_protein_TW95_gp0187__YP_009119156__Pandoravirus_inopinatum__1605721__D316-416
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4jxtA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.69 62.0 5.96e-01 99.1% 96.9%
5m9dA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.68 61.0 5.72e-01 99.1% 93.5%
3lpzA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.67 61.0 4.44e-01 100.0% 42.1%
2wpvE00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.66 60.0 4.49e-01 100.0% 46.4%
2iqcA00 1.25.40.490 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.66 59.0 5.16e-01 100.0% 76.3%
4jgwA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.66 46.0 4.12e-01 70.8% 92.3%
4f5cA04 1.25.50.20 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › 0.65 58.0 4.15e-01 98.2% 40.4%
4m0mA04 1.20.1270.440 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.65 29.0 2.95e-01 92.0% 40.2%
2l6jA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.65 48.0 4.88e-01 78.8% 82.9%
4gpkF02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 48.0 3.81e-01 81.4% 42.5%
4crwA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.63 56.0 4.53e-01 100.0% 61.9%
3ma5A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 47.0 5.07e-01 82.3% 100.0%
5ctrA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 56.0 4.11e-01 100.0% 41.6%
2qk2A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.62 55.0 4.42e-01 100.0% 56.0%
5z62E00 1.25.40.40 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI 0.62 50.0 5.11e-01 88.5% 93.6%
1qqeA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 53.0 4.03e-01 100.0% 49.8%
2b6cA01 1.20.1660.10 Mainly Alpha › Up-down Bundle › ARM repeat fold › Hypothetical protein (EF3068) 0.60 47.0 4.71e-01 85.0% 100.0%
2lahA00 1.25.40.430 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.60 52.0 4.74e-01 100.0% 78.8%
2katA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 46.0 4.64e-01 85.8% 82.6%
4jhrB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 52.0 3.94e-01 100.0% 46.4%
4g1tA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 44.0 4.33e-01 79.6% 74.0%
4gywA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 45.0 4.62e-01 87.6% 88.6%
5nnpE01 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.58 50.0 3.36e-01 100.0% 22.7%
2ho1B00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 47.0 3.82e-01 90.3% 45.2%
2iu1A00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 49.0 4.31e-01 97.3% 73.6%
2pqrA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 40.0 4.34e-01 74.3% 94.6%
3mkqA03 1.25.40.470 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 45.0 3.75e-01 100.0% 47.6%
5jajA03 1.20.1320.30 Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › 0.54 38.0 3.82e-01 72.6% 79.3%
1l6nA02 1.10.375.10 Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein 0.53 40.0 3.82e-01 93.8% 69.5%
1bgfA00 1.10.532.10 Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain 0.51 41.0 3.96e-01 85.8% 76.6%
3u4tB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 44.0 3.47e-01 99.1% 45.1%
2xrhA00 1.20.120.1430 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HP0721 helical bundle 0.50 38.0 4.03e-01 100.0% 93.0%
2lseA00 1.20.120.1360 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.50 34.0 3.59e-01 82.3% 77.2%
4dmbB00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.50 37.0 3.16e-01 77.0% 93.7%
2chpA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.50 38.0 3.52e-01 80.5% 89.2%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3467097 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.72 63.0 4.33e-01 95.6% 29.7%
3335296 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.70 58.0 6.08e-01 93.8% 100.0%
3267498 109.6.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N 0.70 56.0 3.73e-01 85.0% 36.4%
3832497 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.70 63.0 4.27e-01 100.0% 37.8%
3482910 109.6.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N 0.70 57.0 3.77e-01 87.6% 28.3%
3495203 109.6.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N 0.70 57.0 3.83e-01 86.7% 31.5%
3662781 109.4.1.1280 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long 0.69 61.0 4.14e-01 95.6% 28.5%
3302239 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.69 62.0 4.98e-01 100.0% 51.1%
3796460 109.6.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N 0.69 57.0 3.75e-01 87.6% 26.1%
3810909 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.69 62.0 5.00e-01 100.0% 52.9%
3268031 109.6.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N 0.68 56.0 3.74e-01 87.6% 27.4%
3271711 109.6.1.3 ↗ alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF_N 0.68 54.0 5.05e-01 85.0% 85.7%
4029508 109.4.1.588 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FPL 0.68 60.0 3.94e-01 99.1% 29.1%
3934037 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 61.0 4.51e-01 100.0% 63.2%
3245866 109.4.1.1140 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_PEP5_VPS11 0.67 56.0 3.74e-01 100.0% 23.4%
3201093 109.4.1.465 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SPO22 0.67 59.0 3.72e-01 100.0% 24.0%
3393651 109.4.1.1145 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IQ 0.67 60.0 4.40e-01 100.0% 43.8%
3651863 109.4.1.1257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.66 59.0 5.07e-01 99.1% 66.7%
3426286 109.4.1.621 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3 0.66 59.0 4.83e-01 98.2% 78.5%
3675493 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 57.0 5.30e-01 98.2% 75.2%
3426988 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.65 58.0 5.61e-01 100.0% 86.2%
5072397 4095.1.1.1 ↗ alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N 0.65 49.0 5.07e-01 98.2% 83.8%
3679337 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.65 52.0 5.35e-01 96.5% 92.4%
3239412 109.4.1.285 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PSMD12-CSN4_N 0.65 56.0 5.25e-01 95.6% 82.9%
3458514 109.4.1.1274 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long 0.64 57.0 4.19e-01 100.0% 54.2%
3767517 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 56.0 5.05e-01 98.2% 94.4%
3356444 109.4.1.1271 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 0.64 53.0 5.38e-01 94.7% 92.7%
3611216 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 52.0 5.03e-01 90.3% 86.2%
3396657 109.4.1.160 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF3384 0.63 56.0 4.51e-01 99.1% 72.9%
3271685 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 56.0 4.06e-01 100.0% 36.8%
3261525 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 57.0 4.11e-01 98.2% 46.8%
3171700 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 57.0 5.25e-01 100.0% 89.7%
5025827 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 50.0 4.01e-01 87.6% 47.8%
3224218 109.4.1.342 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SBF2 0.62 54.0 4.41e-01 100.0% 72.6%
4162395 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 54.0 4.33e-01 100.0% 57.1%
3284763 109.4.1.1418 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_12 0.62 55.0 4.97e-01 100.0% 89.7%
3863083 109.4.1.1150 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_INTS8 0.61 54.0 3.58e-01 100.0% 48.7%
4011986 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 54.0 4.19e-01 98.2% 74.3%
3971114 109.4.1.2369 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27483 0.60 53.0 4.74e-01 98.2% 68.5%
3356441 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.59 51.0 4.43e-01 98.2% 61.1%
3517194 109.54.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 0.59 48.0 3.23e-01 92.0% 21.0%
3821288 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.59 46.0 4.14e-01 99.1% 60.0%
3287720 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 52.0 4.06e-01 100.0% 46.0%
3929489 109.4.1.295 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COP9_hel_rpt 0.58 51.0 3.82e-01 100.0% 41.3%
4254676 109.4.1.890 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_CNRKL1_C 0.57 46.0 4.72e-01 88.5% 94.5%
3684212 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 51.0 4.61e-01 99.1% 98.1%
3714425 109.4.1.210 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 0.57 47.0 4.68e-01 92.0% 87.8%
3509325 109.4.1.235 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP68 0.56 44.0 3.09e-01 85.0% 28.5%
3821022 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.56 49.0 3.83e-01 100.0% 45.4%
4975757 109.4.1.218 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SNAP 0.54 43.0 3.34e-01 86.7% 77.0%
3235777 109.4.1.1568 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_6, TPR_8 0.53 45.0 3.67e-01 100.0% 59.6%
3775668 109.4.1.1150 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_INTS8 0.50 44.0 3.78e-01 96.5% 81.1%
D2 medium residues 522-588
PDB