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hypothetical_protein_pmac_cds_803
Euk-VirPandoravirus_macleodensis
hypothetical_protein_pmac_cds_803__YP_009481487__Pandoravirus_macleodensis__2107707
Identity
- Accession:
- YP_009481487 ↗
- Protein ID:
- hypothetical_protein_pmac_cds_803
- Kingdom:
- euk
Quality
72.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 157-301_359-381
Domain cluster:
rep: LD_Run2_08_scaffold_35_prodigal-single.1__X__X__00177__D121-323
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04665.19 best | Pox_A32 | 25.2 | 1.50e-05 | 85.7% | 55.4% |
D2
medium
residues 302-358
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4s3nA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.62 | 41.0 | 3.11e-01 | 75.4% | 27.2% |
| 1jo0A00 | 3.30.110.60 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › YhbY-like | 0.57 | 36.0 | 3.10e-01 | 73.7% | 36.1% |
| 3njtA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.57 | 41.0 | 3.85e-01 | 84.2% | 61.6% |
| 6wimA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.54 | 36.0 | 3.38e-01 | 70.2% | 60.8% |
| 3c9gA01 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.53 | 39.0 | 3.16e-01 | 82.5% | 46.0% |
| 6grrA03 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 40.0 | 3.36e-01 | 86.0% | 85.8% |
| 3gygC02 | 3.30.70.1410 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › yhjk (haloacid dehalogenase-like hydrolase protein) domain | 0.52 | 35.0 | 3.26e-01 | 71.9% | 52.5% |
| 2nwuB01 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.52 | 39.0 | 3.16e-01 | 86.0% | 42.9% |
| 3ibjA02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.52 | 35.0 | 2.56e-01 | 71.9% | 90.3% |
| 1w7cA03 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 36.0 | 3.05e-01 | 78.9% | 92.2% |
| 2azeB00 | 6.10.250.540 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.51 | 26.0 | 2.14e-01 | 71.9% | 29.7% |
| 3lr5A00 | 3.30.450.300 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Sensor histidine kinase RisS, periplasmic domain | 0.50 | 34.0 | 2.83e-01 | 73.7% | 70.6% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3410938 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.57 | 41.0 | 3.64e-01 | 77.2% | 61.2% |
| 3989767 | 2008.1.1.152 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF2130 | 0.56 | 39.0 | 2.78e-01 | 73.7% | 25.0% |
| 3546134 | 10.12.1.108 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › POPDC1-3 | 0.55 | 44.0 | 3.26e-01 | 91.2% | 84.4% |
| 5027451 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.53 | 36.0 | 3.03e-01 | 71.9% | 70.5% |
| 3820521 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.52 | 40.0 | 2.57e-01 | 87.7% | 46.6% |
| 3581947 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.51 | 35.0 | 3.08e-01 | 75.4% | 59.0% |