←Back to structures
hypothetical_protein_pmac_cds_804
Euk-VirPandoravirus_macleodensis
hypothetical_protein_pmac_cds_804__YP_009481488__Pandoravirus_macleodensis__2107707
Identity
- Accession:
- YP_009481488 ↗
- Protein ID:
- hypothetical_protein_pmac_cds_804
- Kingdom:
- euk
Quality
55.8
mean pLDDT
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 52-200
D2
high
residues 235-367
D3
high
residues 459-555
D4
high
residues 579-692
Domain cluster:
rep: hypothetical_protein_psal_cds_228__YP_008436829__Pandoravirus_salinus__1349410__D350-478
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hl4A01 | 1.10.8.1310 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.70 | 45.0 | 4.16e-01 | 71.9% | 51.4% |
| 2y1eA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.56 | 41.0 | 4.55e-01 | 76.3% | 98.9% |
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.56 | 40.0 | 4.49e-01 | 74.6% | 100.0% |
| 4rflA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.56 | 45.0 | 3.71e-01 | 86.0% | 99.0% |
| 7znvA01 | 1.10.489.10 | Mainly Alpha › Orthogonal Bundle › Chloroperoxidase › Chloroperoxidase-like | 0.55 | 44.0 | 3.67e-01 | 90.4% | 49.2% |
| 4wbyA02 | 1.10.3090.10 | Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2 | 0.54 | 46.0 | 3.65e-01 | 98.2% | 44.9% |
| 3i7aA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.52 | 43.0 | 3.28e-01 | 91.2% | 72.8% |
| 1nktA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.52 | 36.0 | 3.13e-01 | 71.1% | 94.4% |
| 6fmhB01 | 1.10.3160.10 | Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 | 0.51 | 40.0 | 3.54e-01 | 84.2% | 77.9% |
| 3v93F01 | 1.10.1300.10 | Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | 0.51 | 45.0 | 3.35e-01 | 99.1% | 66.7% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.51 | 31.0 | 3.68e-01 | 70.2% | 89.5% |
| 2r7rA02 | 1.20.120.1390 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.51 | 39.0 | 3.62e-01 | 83.3% | 70.6% |
| 5oklA01 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.51 | 40.0 | 4.21e-01 | 86.0% | 94.1% |
| 4iu9B01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.50 | 35.0 | 2.92e-01 | 72.8% | 46.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3592519 | 2004.5.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain | 0.62 | 44.0 | 3.69e-01 | 73.7% | 92.1% |
| 5001331 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.59 | 42.0 | 4.24e-01 | 74.6% | 89.6% |
| 4031157 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.54 | 43.0 | 3.32e-01 | 88.6% | 81.7% |
| 4948074 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.52 | 43.0 | 3.16e-01 | 90.4% | 92.9% |
| 3246356 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.51 | 41.0 | 2.75e-01 | 89.5% | 65.2% |
| 4579981 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.50 | 36.0 | 3.72e-01 | 75.4% | 90.0% |
| 3508893 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.50 | 44.0 | 3.66e-01 | 100.0% | 53.5% |