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hypothetical_protein_pmac_cds_897
Euk-VirPandoravirus_macleodensis
hypothetical_protein_pmac_cds_897__YP_009481581__Pandoravirus_macleodensis__2107707
Identity
- Accession:
- YP_009481581 ↗
- Protein ID:
- hypothetical_protein_pmac_cds_897
- Kingdom:
- euk
Quality
75.5
mean pLDDT
Cluster
View cluster (60 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 142-196_224-249
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ggyA00 | 1.20.1260.60 | Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1 | 0.74 | 54.0 | 4.02e-01 | 75.3% | 89.8% |
| 2uubT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.71 | 53.0 | 5.02e-01 | 80.2% | 83.8% |
| 3lpzA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.71 | 64.0 | 4.28e-01 | 100.0% | 29.1% |
| 3cqcA00 | 1.20.190.50 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › | 0.70 | 57.0 | 4.01e-01 | 87.7% | 72.9% |
| 5kbwB00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.69 | 52.0 | 4.11e-01 | 81.5% | 49.7% |
| 3ljnA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.68 | 62.0 | 4.10e-01 | 100.0% | 27.3% |
| 1vctA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.68 | 49.0 | 4.43e-01 | 75.3% | 86.2% |
| 1vkeB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.67 | 61.0 | 5.63e-01 | 98.8% | 79.2% |
| 1juqC00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.67 | 58.0 | 4.85e-01 | 100.0% | 67.8% |
| 3bjdA01 | 1.10.1240.20 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain | 0.67 | 48.0 | 4.72e-01 | 76.5% | 90.9% |
| 1elkA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.66 | 56.0 | 4.69e-01 | 100.0% | 65.4% |
| 2qeuB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.64 | 57.0 | 4.84e-01 | 98.8% | 77.4% |
| 4jxtA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.64 | 56.0 | 4.85e-01 | 100.0% | 73.8% |
| 4me2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 56.0 | 4.30e-01 | 100.0% | 45.9% |
| 1m5iA00 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.63 | 39.0 | 3.60e-01 | 90.1% | 48.6% |
| 3mekA04 | 1.25.40.970 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 47.0 | 4.74e-01 | 80.2% | 88.7% |
| 3u8vA00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.62 | 46.0 | 4.60e-01 | 77.8% | 83.1% |
| 6axfA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.62 | 54.0 | 4.78e-01 | 96.3% | 86.3% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.61 | 47.0 | 4.33e-01 | 79.0% | 69.0% |
| 4flbA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 54.0 | 4.63e-01 | 100.0% | 66.4% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.61 | 38.0 | 3.81e-01 | 87.7% | 61.2% |
| 3ltoA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.59 | 46.0 | 3.77e-01 | 80.2% | 73.1% |
| 1n00A03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.59 | 40.0 | 4.22e-01 | 72.8% | 97.3% |
| 4hxiB03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.58 | 45.0 | 4.30e-01 | 86.4% | 83.8% |
| 3beyD00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.58 | 45.0 | 4.34e-01 | 82.7% | 84.0% |
| 2jx0A00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.58 | 43.0 | 3.61e-01 | 77.8% | 71.8% |
| 3k17A02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.56 | 45.0 | 3.65e-01 | 82.7% | 75.7% |
| 3ihuA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.54 | 41.0 | 3.47e-01 | 81.5% | 73.4% |
| 4uqxA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 41.0 | 4.00e-01 | 97.5% | 80.9% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3257617 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.81 | 74.0 | 4.57e-01 | 100.0% | 21.6% |
| 3526075 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.75 | 68.0 | 5.11e-01 | 100.0% | 44.1% |
| 3276104 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.73 | 64.0 | 4.80e-01 | 100.0% | 62.4% |
| 3647721 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.73 | 65.0 | 5.43e-01 | 100.0% | 58.5% |
| 3488690 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.73 | 57.0 | 3.74e-01 | 96.3% | 21.3% |
| 3515156 | 109.30.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin Nup84/Nup107 › Nucleoporin Nup84/Nup107 › Nup84_Nup100 | 0.71 | 60.0 | 4.10e-01 | 92.6% | 70.7% |
| 3628101 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.68 | 54.0 | 4.68e-01 | 86.4% | 82.4% |
| 3418855 | 109.12.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal domain of Ku80 › C-terminal domain of Ku80 › Ku_PK_bind | 0.67 | 59.0 | 4.76e-01 | 100.0% | 70.6% |
| 3348296 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 57.0 | 5.25e-01 | 100.0% | 72.4% |
| 3471284 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.67 | 53.0 | 4.05e-01 | 82.7% | 88.8% |
| 3616226 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.67 | 53.0 | 4.67e-01 | 86.4% | 81.7% |
| 4012080 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 58.0 | 4.17e-01 | 100.0% | 53.0% |
| 3648543 | 6155.1.1.16 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PF28566 | 0.67 | 53.0 | 3.95e-01 | 84.0% | 60.0% |
| 3306869 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.67 | 59.0 | 3.95e-01 | 98.8% | 28.1% |
| 3833881 | 6155.1.1.16 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PF28566 | 0.66 | 52.0 | 4.43e-01 | 84.0% | 89.2% |
| 3519106 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 56.0 | 4.57e-01 | 100.0% | 65.5% |
| 3185556 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 57.0 | 4.79e-01 | 98.8% | 74.3% |
| 2029562 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 55.0 | 4.17e-01 | 96.3% | 49.7% |
| 4649151 | 109.4.1.317 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med5 | 0.64 | 56.0 | 4.30e-01 | 97.5% | 73.5% |
| 3583659 | 109.4.1.1735 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_8, TPR_12, TPR_16 | 0.64 | 57.0 | 4.74e-01 | 98.8% | 63.6% |
| 3719710 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 54.0 | 4.69e-01 | 100.0% | 80.0% |
| 3237006 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.62 | 48.0 | 4.36e-01 | 86.4% | 85.2% |
| 3928745 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.60 | 47.0 | 4.09e-01 | 84.0% | 88.0% |
| 3299663 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 45.0 | 4.17e-01 | 80.2% | 67.6% |
| 3534927 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.59 | 46.0 | 3.97e-01 | 84.0% | 88.8% |
| 4969693 | 4266.2.1.2 ↗ | alpha bundles › Hyaluronidase domain-like › TTHA0068-like › TTHA0068-like › Csm6_6H | 0.57 | 46.0 | 4.20e-01 | 85.2% | 66.7% |
| 3489386 | 604.17.1.0 ↗ | alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like | 0.55 | 46.0 | 4.12e-01 | 96.3% | 90.8% |
D2
medium
residues 413-516