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hypothetical_protein_pneo_cds_1054
Euk-VirPandoravirus_neocaledonia
hypothetical_protein_pneo_cds_1054__YP_009482664__Pandoravirus_neocaledonia__2107708
Identity
- Accession:
- YP_009482664 ↗
- Protein ID:
- hypothetical_protein_pneo_cds_1054
- Kingdom:
- euk
Quality
73.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 18-119
Domain cluster:
rep: hypothetical_protein_pneo_cds_1032__YP_009482642__Pandoravirus_neocaledonia__2107708__D13-104
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8d0vA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.62 | 54.0 | 3.71e-01 | 99.0% | 41.9% |
| 2lahA00 | 1.25.40.430 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 51.0 | 4.45e-01 | 100.0% | 73.1% |
| 4eadA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.57 | 45.0 | 4.44e-01 | 87.3% | 99.1% |
| 2iufA02 | 1.20.1370.20 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Catalase, four-helical domain | 0.55 | 33.0 | 3.38e-01 | 80.4% | 60.2% |
| 4dziB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.54 | 44.0 | 3.10e-01 | 94.1% | 50.8% |
| 3f1sA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.51 | 43.0 | 3.36e-01 | 95.1% | 94.5% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3273273 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.73 | 63.0 | 5.28e-01 | 94.1% | 67.4% |
| 3259494 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.71 | 64.0 | 4.39e-01 | 100.0% | 39.2% |
| 3253258 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.69 | 60.0 | 5.13e-01 | 98.0% | 77.6% |
| 3254419 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.68 | 61.0 | 4.70e-01 | 100.0% | 49.8% |
| 3264767 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.66 | 59.0 | 5.27e-01 | 100.0% | 86.2% |
| 3253289 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.66 | 55.0 | 4.94e-01 | 93.1% | 72.4% |
| 3382990 | 109.3.1.188 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF28568 | 0.63 | 54.0 | 3.98e-01 | 97.1% | 92.5% |
| 3259836 | 109.3.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 | 0.62 | 54.0 | 5.11e-01 | 98.0% | 100.0% |
| 3381999 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.60 | 52.0 | 4.46e-01 | 100.0% | 66.9% |
| 3267273 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.59 | 50.0 | 4.82e-01 | 93.1% | 87.0% |
| 3347410 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.57 | 50.0 | 4.64e-01 | 100.0% | 89.6% |
| 4986887 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.54 | 40.0 | 2.86e-01 | 80.4% | 66.2% |
| 4434445 | 109.4.1.192 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 | 0.53 | 46.0 | 3.98e-01 | 100.0% | 67.6% |
| 3596224 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 45.0 | 4.21e-01 | 98.0% | 83.1% |
| 4086555 | 109.4.1.1453 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_17 | 0.52 | 43.0 | 4.01e-01 | 94.1% | 79.3% |
| 3229523 | 109.4.1.1306 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_11 | 0.51 | 43.0 | 3.82e-01 | 94.1% | 69.7% |
| 3739618 | 109.4.1.735 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UBA | 0.51 | 44.0 | 3.46e-01 | 100.0% | 56.6% |