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hypothetical_protein_pneo_cds_10
Euk-VirPandoravirus_neocaledonia
hypothetical_protein_pneo_cds_10__YP_009481620__Pandoravirus_neocaledonia__2107708
Identity
- Accession:
- YP_009481620 ↗
- Protein ID:
- hypothetical_protein_pneo_cds_10
- Kingdom:
- euk
Quality
77.1
mean pLDDT
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 75-131
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3q71A00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.56 | 48.0 | 3.32e-01 | 100.0% | 43.8% |
| 3rhfD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 40.0 | 2.72e-01 | 100.0% | 51.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3182011 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.78 | 53.0 | 5.90e-01 | 71.9% | 91.1% |
| 3632435 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.67 | 53.0 | 4.28e-01 | 86.0% | 65.5% |
| 3812115 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.66 | 58.0 | 5.37e-01 | 100.0% | 87.7% |
| 3210778 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.66 | 51.0 | 4.76e-01 | 87.7% | 92.0% |
| 3617852 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.66 | 58.0 | 5.43e-01 | 100.0% | 87.1% |
| 3446581 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.65 | 57.0 | 5.03e-01 | 100.0% | 78.8% |
| 3250931 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.63 | 54.0 | 4.99e-01 | 100.0% | 81.3% |
| 3460335 | 207.1.1.172 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBD, LRR_At5g56370 | 0.61 | 53.0 | 3.20e-01 | 100.0% | 21.2% |
| 3382476 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.60 | 51.0 | 4.85e-01 | 100.0% | 84.3% |
D2
medium
residues 132-273
Domain cluster:
rep: hypothetical_protein_pqer_cds_620__YP_009483311__Pandoravirus_quercus__2107709__D67-120_255-320
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.78 | 54.0 | 5.12e-01 | 70.4% | 89.6% |
| 2rkkA01 | 1.25.40.270 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 | 0.76 | 40.0 | 3.88e-01 | 75.4% | 46.8% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.73 | 38.0 | 4.81e-01 | 75.4% | 83.5% |
| 1fioA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 50.0 | 4.53e-01 | 70.4% | 85.3% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 37.0 | 4.94e-01 | 75.4% | 94.5% |
| 1dlcA01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.70 | 51.0 | 4.34e-01 | 75.4% | 78.2% |
| 3qhbA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 47.0 | 4.36e-01 | 70.4% | 86.0% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.68 | 37.0 | 4.36e-01 | 82.4% | 76.3% |
| 1w99A01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.66 | 53.0 | 5.01e-01 | 85.2% | 93.1% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.65 | 44.0 | 4.58e-01 | 85.9% | 72.9% |
| 3u0cA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.65 | 39.0 | 3.90e-01 | 76.8% | 57.0% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.64 | 44.0 | 5.02e-01 | 83.1% | 93.4% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 45.0 | 4.92e-01 | 88.7% | 88.3% |
| 4id0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.62 | 45.0 | 5.00e-01 | 83.8% | 94.6% |
| 5j1hA01 | 1.20.58.1060 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 48.0 | 4.41e-01 | 82.4% | 82.4% |
| 4hkaA01 | 1.20.58.480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 54.0 | 4.28e-01 | 97.9% | 89.8% |
| 3rkvA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 45.0 | 4.47e-01 | 94.4% | 74.8% |
| 3rkgA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.60 | 44.0 | 4.18e-01 | 74.6% | 84.8% |
| 2ondA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 52.0 | 4.09e-01 | 100.0% | 44.5% |
| 3wozB00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.59 | 48.0 | 4.09e-01 | 100.0% | 53.7% |
| 4aifA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 44.0 | 4.43e-01 | 95.1% | 77.1% |
| 3lpzA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 48.0 | 3.76e-01 | 93.0% | 41.4% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 48.0 | 4.41e-01 | 94.4% | 67.2% |
| 3gs3A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.58 | 52.0 | 4.38e-01 | 100.0% | 88.4% |
| 1fewA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 47.0 | 4.38e-01 | 85.9% | 72.8% |
| 2r17C00 | 1.25.40.660 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein 35, helical subcomplex Vps35-C | 0.57 | 52.0 | 4.10e-01 | 100.0% | 54.0% |
| 1dd5A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.57 | 39.0 | 4.43e-01 | 82.4% | 91.7% |
| 3zheB02 | 1.20.190.60 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › | 0.56 | 49.0 | 4.54e-01 | 95.8% | 93.4% |
| 2chnB03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.56 | 44.0 | 4.02e-01 | 81.7% | 78.3% |
| 3pjaJ01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.55 | 42.0 | 4.41e-01 | 84.5% | 87.8% |
| 2lxlA00 | 1.25.40.270 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 | 0.55 | 38.0 | 3.63e-01 | 70.4% | 72.4% |
| 2q12A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.55 | 39.0 | 3.25e-01 | 73.9% | 66.1% |
| 2v5cA03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.54 | 42.0 | 4.41e-01 | 81.7% | 96.2% |
| 6hftA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 37.0 | 3.86e-01 | 94.4% | 77.2% |
| 8cdaB03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 42.0 | 4.03e-01 | 86.6% | 72.3% |
| 7ldgA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.54 | 48.0 | 4.20e-01 | 100.0% | 90.0% |
| 3i9wA00 | 1.20.58.920 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 42.0 | 3.34e-01 | 83.8% | 82.6% |
| 4fzsA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.52 | 38.0 | 3.33e-01 | 76.1% | 79.4% |
| 3fayA00 | 1.10.506.10 | Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1 | 0.51 | 46.0 | 3.37e-01 | 97.9% | 77.8% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3188275 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.74 | 52.0 | 4.76e-01 | 71.1% | 89.4% |
| 3273624 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.74 | 55.0 | 6.19e-01 | 98.6% | 100.0% |
| 3715315 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.72 | 52.0 | 4.22e-01 | 74.6% | 81.9% |
| 3733962 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.71 | 52.0 | 3.72e-01 | 76.1% | 47.7% |
| 4656420 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.70 | 50.0 | 4.99e-01 | 73.2% | 91.0% |
| 4993188 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.68 | 48.0 | 4.31e-01 | 71.8% | 92.8% |
| 3943140 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.68 | 50.0 | 4.49e-01 | 74.6% | 92.6% |
| 3184857 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.68 | 59.0 | 5.11e-01 | 93.0% | 75.8% |
| 3695311 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.68 | 60.0 | 5.01e-01 | 94.4% | 70.6% |
| 3236786 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.68 | 38.0 | 3.91e-01 | 86.6% | 55.7% |
| 4993743 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.67 | 48.0 | 4.34e-01 | 72.5% | 92.6% |
| 4141036 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.66 | 47.0 | 4.82e-01 | 73.2% | 98.6% |
| 3925622 | 603.1.1.97 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE | 0.66 | 53.0 | 4.40e-01 | 83.8% | 87.2% |
| 4848262 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.65 | 43.0 | 4.88e-01 | 84.5% | 88.8% |
| 3954868 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.65 | 46.0 | 4.12e-01 | 72.5% | 94.5% |
| 5001458 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.65 | 47.0 | 4.28e-01 | 74.6% | 94.7% |
| 3871543 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.65 | 43.0 | 4.52e-01 | 83.1% | 73.8% |
| 3743077 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.63 | 47.0 | 5.02e-01 | 93.7% | 89.6% |
| 3895294 | 192.5.1.2 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › Tiam_CC_Ex | 0.62 | 43.0 | 4.47e-01 | 70.4% | 85.4% |
| 3700263 | 601.11.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain › Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain | 0.61 | 44.0 | 4.28e-01 | 85.9% | 67.7% |
| 3709598 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.61 | 44.0 | 4.27e-01 | 85.9% | 67.7% |
| 3665127 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 51.0 | 4.73e-01 | 90.1% | 91.1% |
| 3220374 | 5001.1.1.84 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srz | 0.60 | 48.0 | 3.99e-01 | 85.2% | 65.2% |
| 3325789 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.59 | 54.0 | 4.58e-01 | 100.0% | 87.0% |
| 3275449 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.58 | 47.0 | 4.20e-01 | 83.8% | 80.0% |
| None | — | 0.58 | 52.0 | 3.50e-01 | 100.0% | 28.2% | |
| 4028277 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 51.0 | 4.03e-01 | 98.6% | 63.6% |
| 4189855 | 1203.1.2.11 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › PPPI_inhib | 0.56 | 44.0 | 4.06e-01 | 81.0% | 95.6% |
| 3323007 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.56 | 40.0 | 3.14e-01 | 73.2% | 52.7% |
| 3991432 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 51.0 | 4.27e-01 | 100.0% | 96.7% |
| 3228861 | 5001.1.1.27 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Sre | 0.55 | 45.0 | 3.50e-01 | 87.3% | 60.3% |
| 3499472 | 3758.1.1.42 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › Choline_transpo | 0.55 | 46.0 | 3.55e-01 | 86.6% | 92.5% |
| 3346803 | 5076.2.1.10 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › PF29520 | 0.55 | 46.0 | 3.52e-01 | 87.3% | 40.7% |
| 3213897 | 5001.1.1.45 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Sra | 0.55 | 44.0 | 3.42e-01 | 85.9% | 64.7% |
| 5039267 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.54 | 45.0 | 4.09e-01 | 89.4% | 73.7% |
| 3612163 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.53 | 43.0 | 3.63e-01 | 85.2% | 67.7% |
| 3589146 | 1075.5.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt | 0.53 | 44.0 | 4.05e-01 | 89.4% | 75.1% |
| 3916044 | 3684.1.1.35 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › JMY | 0.53 | 42.0 | 4.06e-01 | 83.8% | 98.1% |
| 3298761 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.53 | 42.0 | 3.53e-01 | 83.8% | 79.6% |
| 3600894 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.53 | 42.0 | 3.62e-01 | 81.7% | 80.0% |
| 5030657 | 1075.5.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt | 0.53 | 41.0 | 3.62e-01 | 84.5% | 66.4% |
| 5077995 | 1075.5.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt | 0.52 | 41.0 | 3.75e-01 | 84.5% | 76.4% |
| 3428463 | 5050.1.1.55 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr, MFS_1 | 0.52 | 44.0 | 3.07e-01 | 91.5% | 64.7% |
| 3609516 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.51 | 39.0 | 3.63e-01 | 78.9% | 77.1% |
| 4952397 | 1075.5.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE | 0.51 | 39.0 | 3.46e-01 | 81.7% | 74.4% |
| 4876531 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.50 | 41.0 | 3.71e-01 | 84.5% | 84.7% |
D3
medium
residues 329-408
D4
medium
residues 409-507
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rngC00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.60 | 42.0 | 4.51e-01 | 85.9% | 84.3% |
| 3nb2A02 | 1.25.40.300 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein | 0.60 | 52.0 | 4.57e-01 | 100.0% | 78.1% |
| 2o8pA00 | 1.20.190.20 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain | 0.59 | 51.0 | 4.03e-01 | 99.0% | 73.5% |
| 5cwkA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 47.0 | 4.09e-01 | 100.0% | 75.0% |
| 6xy4A01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.52 | 38.0 | 3.54e-01 | 74.7% | 71.5% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.52 | 37.0 | 3.77e-01 | 86.9% | 75.3% |
| 6ks6q01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.52 | 42.0 | 3.11e-01 | 88.9% | 49.1% |
| 1grlB01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.52 | 42.0 | 3.25e-01 | 90.9% | 75.8% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4017062 | 109.3.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank | 0.69 | 63.0 | 4.52e-01 | 100.0% | 36.1% |
| 3208410 | 109.4.1.27 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › W2 | 0.69 | 60.0 | 4.87e-01 | 96.0% | 66.3% |
| 3714170 | 5.1.4.74 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N | 0.68 | 49.0 | 3.10e-01 | 96.0% | 14.8% |
| 3272965 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.66 | 60.0 | 5.88e-01 | 99.0% | 98.1% |
| 2157267 | 109.4.1.204 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_EZ | 0.63 | 47.0 | 4.49e-01 | 78.8% | 88.8% |
| 3692148 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.62 | 48.0 | 4.20e-01 | 82.8% | 82.7% |
| 3268234 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 50.0 | 4.50e-01 | 91.9% | 84.1% |
| 3643652 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.59 | 52.0 | 4.65e-01 | 100.0% | 72.4% |
| 3503769 | 633.4.1.0 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor | 0.51 | 43.0 | 3.91e-01 | 89.9% | 82.3% |
| 3707921 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.50 | 40.0 | 3.93e-01 | 88.9% | 78.2% |