hypothetical_protein_pneo_cds_171

Euk-Vir

Pandoravirus_neocaledonia

hypothetical_protein_pneo_cds_171__YP_009481781__Pandoravirus_neocaledonia__2107708

Identity

76.3 mean pLDDT

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

View cluster (30 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-81

PDB

Domain cluster: rep: hypothetical_protein_pmac_cds_463__YP_009481147__Pandoravirus_macleodensis__2107707__D140-197

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3v7dD01	1.20.1280.50	Mainly Alpha › Up-down Bundle › Monooxygenase ›	0.68	59.0	5.36e-01	100.0%	90.0%
3pubA01	1.10.10.2400	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain	0.66	52.0	5.15e-01	93.1%	82.4%
2jifA01	1.10.540.10	Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain	0.61	43.0	3.72e-01	75.0%	71.2%
4hehA01	1.10.1240.10	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain	0.56	46.0	4.41e-01	91.7%	85.5%
5hayA02	1.25.40.440	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Nucleoporin, helical domain, central subdomain	0.54	38.0	3.74e-01	98.6%	68.4%
4it4A02	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.53	46.0	4.32e-01	100.0%	89.0%
3e54A00	3.10.28.10	Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases	0.53	40.0	3.21e-01	84.7%	75.5%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3191430	145.1.1.0 ↗	alpha arrays › F-box domain › F-box domain › F-box domain	0.73	58.0	5.52e-01	100.0%	73.5%
3817490	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.72	51.0	4.53e-01	75.0%	77.9%
3787916	145.1.1.3 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like	0.71	62.0	5.52e-01	94.4%	73.0%
3171955	145.1.1.1 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box	0.66	59.0	5.42e-01	100.0%	96.8%
3057625	3455.1.1.0 ↗	alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors	0.56	42.0	4.10e-01	90.3%	73.4%
3452886	145.1.1.60 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › Beta-prop_KIB1-4	0.56	50.0	3.89e-01	97.2%	67.3%
3940942	206.1.1.8 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase,FATC	0.54	45.0	2.87e-01	98.6%	41.6%
3202558	610.2.1.1 ↗	alpha arrays › ERP29 C domain-like › Helical domain of Sec23/24 › Helical domain of Sec23/24 › Sec23_helical	0.51	40.0	3.55e-01	84.7%	86.7%
3727956	2006.1.2.1 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH	0.51	45.0	2.91e-01	100.0%	74.1%
3923800	133.1.1.1 ↗	alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF	0.50	42.0	2.95e-01	94.4%	49.6%

D2 high residues 87-175

PDB

D3 high residues 183-322

PDB

Domain cluster: rep: hypothetical_protein_TW95_gp1026__YP_009119995__Pandoravirus_inopinatum__1605721__D192-256_273-350

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3cz8A02	3.10.50.10	Alpha Beta › Roll › Chitinase A; domain 3 ›	0.56	26.0	3.65e-01	87.9%	100.0%
5jh8A02	3.10.50.10	Alpha Beta › Roll › Chitinase A; domain 3 ›	0.55	27.0	3.70e-01	90.7%	97.0%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3225764	840.1.1.0 ↗	a+b two layers › RPB5-like RNA polymerase subunit › RPB5-like RNA polymerase subunit › RPB5-like RNA polymerase subunit	0.67	29.0	4.31e-01	100.0%	95.0%
3183393	223.2.1.5 ↗	a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7	0.51	30.0	3.46e-01	99.3%	81.1%
5073565	223.2.1.0 ↗	a+b three layers › Profilin-like › profilin-like › profilin-like	0.50	29.0	3.44e-01	98.6%	85.6%