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hypothetical_protein_pneo_cds_214

Euk-Vir

Pandoravirus_neocaledonia

hypothetical_protein_pneo_cds_214__YP_009481824__Pandoravirus_neocaledonia__2107708

Identity

Accession:
YP_009481824 ↗
Protein ID:
hypothetical_protein_pneo_cds_214
Kingdom:
euk

Quality

45.3 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 53-156
PDB
D2 medium residues 183-252
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1g5hA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.66 51.0 3.38e-01 84.3% 32.5%
3icaB00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.62 47.0 3.45e-01 84.3% 60.2%
1jkmA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 48.0 3.13e-01 94.3% 28.2%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 39.0 2.36e-01 77.1% 80.6%
3nvqA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 38.0 2.34e-01 77.1% 78.7%
2k49A00 2.30.29.80 Mainly Beta › Roll › PH-domain like › 0.51 34.0 2.96e-01 70.0% 50.8%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3510281 246.3.1.4 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 0.62 48.0 3.47e-01 84.3% 47.8%
5028909 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.59 52.0 3.07e-01 97.1% 16.3%
3501948 2007.1.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like 0.57 40.0 2.91e-01 72.9% 39.0%
4965832 246.2.1.9 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 0.56 39.0 3.06e-01 74.3% 41.8%
3646186 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.56 41.0 2.33e-01 75.7% 21.9%
4986455 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.55 44.0 2.91e-01 90.0% 52.0%
3828373 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.54 46.0 2.94e-01 92.9% 57.0%
4668267 325.1.7.14 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RPOC_hybrid 0.54 38.0 3.46e-01 72.9% 61.1%
3363100 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.53 42.0 2.49e-01 91.4% 90.9%
3559703 101.1.8.12 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › DUF3504 0.52 38.0 2.98e-01 78.6% 43.7%
4421418 330.1.1.3 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer 0.52 39.0 3.39e-01 82.9% 65.2%
3805791 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.52 37.0 2.42e-01 75.7% 18.7%