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hypothetical_protein_pneo_cds_218
Euk-VirPandoravirus_neocaledonia
hypothetical_protein_pneo_cds_218__YP_009481828__Pandoravirus_neocaledonia__2107708
Identity
- Accession:
- YP_009481828 ↗
- Protein ID:
- hypothetical_protein_pneo_cds_218
- Kingdom:
- euk
Quality
80.0
mean pLDDT
Cluster
View cluster (72 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-257
Domain cluster:
rep: hypothetical_protein_TW95_gp0336__YP_009119305__Pandoravirus_inopinatum__1605721__D32-167_207-226
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vctA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.61 | 30.0 | 4.07e-01 | 95.8% | 89.9% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 27.0 | 3.73e-01 | 76.4% | 97.9% |
| 2l1tA00 | 2.30.110.70 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.54 | 24.0 | 3.31e-01 | 76.9% | 81.7% |
| 2ap3A00 | 1.20.120.570 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YkyA-like | 0.53 | 33.0 | 3.49e-01 | 87.5% | 68.8% |
| 3mvpA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 29.0 | 3.46e-01 | 93.1% | 80.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5024001 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.69 | 33.0 | 4.71e-01 | 100.0% | 96.0% |
| 3699782 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.64 | 31.0 | 4.48e-01 | 78.7% | 100.0% |
| 3561875 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.59 | 31.0 | 3.29e-01 | 86.6% | 54.8% |
| 3172093 | 604.1.1.132 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › KAR9 | 0.57 | 33.0 | 4.28e-01 | 71.3% | 100.0% |
| 3917125 | 174.1.1.67 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › MARVEL | 0.54 | 38.0 | 4.21e-01 | 93.1% | 88.6% |
| 3226101 | 109.23.1.3 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal domain in vacuolar protein sorting-associated protein 54 › C-terminal domain in vacuolar protein sorting-associated protein 54 › BCD_RFX | 0.51 | 40.0 | 4.32e-01 | 100.0% | 97.2% |