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hypothetical_protein_pneo_cds_329

Euk-Vir

Pandoravirus_neocaledonia

hypothetical_protein_pneo_cds_329__YP_009481939__Pandoravirus_neocaledonia__2107708

Identity

Accession:
YP_009481939 ↗
Protein ID:
hypothetical_protein_pneo_cds_329
Kingdom:
euk

Quality

75.7 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

Cluster

View cluster (28 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 10-266
PDB
Domain cluster: rep: hypothetical_protein_pdul_cds_547__YP_008319327__Pandoravirus_dulcis__1349409__D55-272
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gw5A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.65 60.0 4.59e-01 98.8% 58.7%
4qmhA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.65 54.0 5.66e-01 89.1% 95.3%
4cb8A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.64 59.0 4.76e-01 100.0% 70.5%
6xu2A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.63 57.0 4.30e-01 95.7% 52.8%
4atgA00 1.25.40.770 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TAF6, C-terminal HEAT repeat domain 0.62 44.0 4.95e-01 71.2% 99.0%
5vjcA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.62 53.0 5.27e-01 89.9% 99.6%
3au3A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.61 52.0 4.92e-01 88.7% 94.7%
1xqrA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.61 51.0 5.13e-01 88.7% 97.4%
4kx7A04 1.25.50.20 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › 0.58 39.0 3.67e-01 73.5% 53.3%
3ltjA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.57 41.0 4.61e-01 84.8% 96.9%
4xi0F00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 37.0 4.34e-01 79.8% 93.3%
6nmgA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.56 51.0 4.36e-01 98.4% 82.4%
2vq2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 37.0 3.99e-01 81.3% 78.2%
7ru9C01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 49.0 4.88e-01 99.2% 91.8%
3mkqA03 1.25.40.470 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.55 43.0 4.65e-01 98.8% 98.6%
5dllA05 1.25.50.10 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain 0.55 43.0 4.07e-01 82.5% 67.9%
4qhpA05 1.25.50.10 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain 0.55 43.0 4.03e-01 82.9% 66.1%
5nnpE01 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.54 42.0 3.46e-01 82.1% 42.8%
3e4bA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 39.0 3.36e-01 79.0% 46.6%
7ep1B01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.54 40.0 4.10e-01 74.3% 89.7%
4i17A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 44.0 4.70e-01 98.1% 99.1%
1xnfA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 35.0 3.55e-01 70.0% 62.9%
3ro3A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 34.0 4.09e-01 72.4% 98.7%
2xpiD00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 48.0 3.85e-01 100.0% 93.8%
4i1aA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 37.0 3.67e-01 75.1% 66.8%
3t8vA05 1.25.50.10 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain 0.52 41.0 3.77e-01 82.5% 64.0%
1qqeA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 44.0 4.35e-01 97.7% 85.4%
6wb9201 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 37.0 3.58e-01 86.4% 65.1%
2gw1A02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.50 37.0 3.30e-01 85.2% 52.8%
7kdtA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.50 35.0 3.25e-01 82.9% 55.5%
3tjzB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.50 42.0 4.23e-01 93.8% 87.9%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3667878 109.4.1.1724 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SPG48, TPR_AP5Z1_C 0.67 61.0 5.06e-01 98.4% 94.2%
5017631 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 56.0 5.12e-01 91.4% 100.0%
3690973 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.64 58.0 4.60e-01 97.3% 67.9%
None — 0.64 54.0 5.26e-01 90.7% 90.0%
3447971 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.63 45.0 4.16e-01 78.2% 55.8%
3815325 109.4.1.1480 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm, Arm_2 0.63 54.0 5.19e-01 90.7% 88.8%
4023322 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 53.0 5.14e-01 89.1% 86.4%
3649588 109.4.1.1258 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.62 50.0 4.57e-01 91.8% 63.9%
3220349 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 52.0 5.15e-01 88.3% 90.9%
3822100 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.61 56.0 4.98e-01 98.4% 73.9%
3582139 109.4.1.921 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_IF140-IFT172 0.61 46.0 3.96e-01 97.7% 48.6%
3584274 109.4.1.1663 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TTI1, TPR_TTI1_C 0.60 52.0 4.66e-01 92.2% 94.9%
3423594 109.4.1.1277 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 0.60 51.0 5.24e-01 99.6% 93.6%
3249419 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 52.0 4.89e-01 98.4% 97.8%
3790191 109.4.1.1414 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TTI1_C 0.58 51.0 4.62e-01 94.2% 98.8%
3368951 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.57 43.0 4.11e-01 91.1% 64.8%
3830030 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.57 40.0 4.21e-01 79.8% 78.3%
3603298 109.4.1.1287 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_6, TPR_8, TPR_16 0.56 39.0 4.34e-01 84.4% 90.8%
3648990 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.56 44.0 3.57e-01 89.9% 43.3%
3671849 109.4.1.2676 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf, TPR_14, TPR_19, PF29376 0.55 49.0 3.60e-01 96.1% 35.2%
3743603 109.4.1.339 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TRAPPC-Trs85 0.55 45.0 4.30e-01 86.0% 83.0%
3782991 109.4.1.934 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_ATR 0.55 42.0 4.64e-01 91.4% 100.0%
4051953 109.4.1.3099 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, TPR_11, TPR_16, TPR_19 0.54 48.0 4.44e-01 95.3% 77.0%
3632767 109.34.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › 26S proteasome subunit Rpn2 N-terminal domain › 26S proteasome subunit Rpn2 N-terminal domain › RPN2_N 0.54 49.0 4.61e-01 100.0% 91.6%
3707374 109.4.1.1341 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COG3_N, COG3_C 0.54 42.0 3.27e-01 79.8% 66.5%
3719872 109.4.1.1160 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RESC10 0.53 48.0 4.15e-01 97.7% 80.0%
3347626 109.4.1.1271 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 0.53 38.0 3.78e-01 81.3% 68.0%
4997375 109.4.1.2382 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29407 0.53 40.0 4.08e-01 84.8% 79.2%
3650842 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.52 41.0 4.08e-01 90.7% 78.5%
5074804 109.4.1.186 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC3 0.51 43.0 4.32e-01 88.7% 91.2%
3704810 109.4.1.17 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin 0.51 46.0 3.95e-01 100.0% 91.7%
3879123 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 42.0 3.43e-01 88.7% 49.1%
3496682 109.4.1.146 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cohesin_load 0.50 40.0 3.71e-01 82.5% 69.4%
5018431 109.4.1.210 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 0.50 36.0 3.26e-01 73.2% 69.6%