hypothetical_protein_pneo_cds_341

Euk-Vir

Pandoravirus_neocaledonia

hypothetical_protein_pneo_cds_341__YP_009481951__Pandoravirus_neocaledonia__2107708

Identity

56.1 mean pLDDT

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

View cluster (19 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 12-52

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1uajA02	1.10.1270.20	Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › tRNA(m1g37)methyltransferase, domain 2	0.64	46.0	3.96e-01	82.9%	63.0%
4pkwA02	1.10.2030.10	Mainly Alpha › Orthogonal Bundle › Anthrax toxin lethal factor, domain 3, chain A › Anthrax toxin lethal factor, domain 3, chain A	0.54	42.0	3.71e-01	87.8%	92.1%
2a2jA00	2.30.110.10	Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A	0.54	43.0	2.85e-01	100.0%	28.1%
3qa8A04	1.20.1270.250	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.53	36.0	2.38e-01	78.0%	63.9%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3703409	4163.1.1.1 ↗	alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5	0.60	42.0	2.89e-01	100.0%	18.3%
4021326	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.57	46.0	2.86e-01	97.6%	85.3%
3360960	145.1.1.1 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box	0.55	39.0	3.20e-01	78.0%	42.5%
4940378	101.1.3.0 ↗	alpha arrays › HTH › HTH › tetra-helical, LuxR-like	0.54	38.0	3.73e-01	82.9%	70.0%

D2 medium residues 223-308

PDB