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hypothetical_protein_pneo_cds_398

Euk-Vir

Pandoravirus_neocaledonia

hypothetical_protein_pneo_cds_398__YP_009482008__Pandoravirus_neocaledonia__2107708

Identity

Accession:
YP_009482008 ↗
Protein ID:
hypothetical_protein_pneo_cds_398
Kingdom:
euk

Quality

71.4 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

Cluster

View cluster (72 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-137
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dc1A01 3.40.91.10 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.68 43.0 3.47e-01 81.9% 33.8%
6jpaE00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.62 39.0 3.42e-01 78.4% 43.2%
4ebjA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.58 37.0 3.64e-01 76.7% 57.8%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.58 48.0 4.81e-01 87.9% 94.1%
5kfzA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.57 48.0 4.71e-01 87.9% 89.4%
3d3oA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.57 41.0 3.57e-01 75.9% 95.5%
1burS00 3.30.190.10 Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit 0.56 39.0 3.86e-01 71.6% 78.9%
3cvzB01 3.30.1490.290 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Low molecular weight S-layer protein, domain 1 0.56 43.0 4.63e-01 100.0% 96.0%
1oaoC01 1.10.8.190 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Carbon monoxide dehydrogenase alpha subunit. Chain M, domain 1 0.56 43.0 4.32e-01 81.0% 88.3%
1qgtB00 1.10.4090.10 Mainly Alpha › Orthogonal Bundle › Hepatitis B viral capsid (hbcag) fold › Viral capsid, core domain supefamily, Hepatitis B virus 0.55 38.0 3.57e-01 87.9% 57.3%
4mmnA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.52 38.0 3.56e-01 75.0% 93.6%
1ysqA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.52 38.0 3.30e-01 75.9% 94.5%
2vjwA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.52 36.0 3.44e-01 71.6% 92.8%
4bkwA03 3.30.500.40 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.51 29.0 2.88e-01 78.4% 50.0%
3mq0B02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.51 37.0 3.25e-01 75.0% 95.9%
6imjA01 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.51 35.0 3.01e-01 70.7% 98.4%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.50 39.0 4.09e-01 82.8% 100.0%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4359864 274.1.1.13 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › GspH 0.71 40.0 3.88e-01 94.0% 51.2%
5002083 1076.1.1.4 ↗ alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › PrsW-protease 0.63 47.0 4.29e-01 78.4% 88.4%
2634595 6175.1.1.1 ↗ a+b two layers › Insertion domain in phosphocholine transferase AnkX › Insertion domain in phosphocholine transferase AnkX › Insertion domain in phosphocholine transferase AnkX › AnkX_ins 0.59 38.0 4.31e-01 72.4% 87.5%
4281749 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.56 44.0 4.37e-01 87.9% 80.0%
3180530 3711.1.1.0 ↗ alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein 0.56 42.0 4.35e-01 78.4% 88.2%
3587259 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.55 41.0 4.53e-01 79.3% 100.0%
4988027 223.1.1.6 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.54 44.0 3.30e-01 87.9% 86.1%
4121961 3561.1.1.1 ↗ a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Med17 0.54 45.0 3.01e-01 87.9% 47.1%
4027412 223.1.1.3 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.54 45.0 3.94e-01 87.9% 95.8%
3968389 302.1.1.0 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain 0.54 40.0 4.28e-01 87.9% 93.0%
3980111 3281.1.1.2 ↗ alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M,Proton_antipo_N 0.53 44.0 2.79e-01 91.4% 77.5%
5050494 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.52 39.0 3.82e-01 79.3% 98.5%
3955717 302.1.1.0 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain 0.52 41.0 4.04e-01 87.9% 78.4%
4972248 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 37.0 3.57e-01 73.3% 95.4%
5000860 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.52 36.0 3.53e-01 72.4% 95.4%
5052689 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.52 36.0 3.56e-01 72.4% 95.2%
4980137 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.51 36.0 3.61e-01 73.3% 99.2%
5049782 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 37.0 3.54e-01 75.9% 88.9%
4943133 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 37.0 3.56e-01 75.9% 96.2%
5051647 862.1.1.1 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.50 37.0 3.00e-01 79.3% 82.9%
5076907 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 36.0 3.50e-01 75.9% 94.1%
4002901 223.2.1.12 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.50 36.0 3.45e-01 75.9% 87.1%
3977606 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.50 35.0 3.82e-01 72.4% 99.0%
D2 medium residues 172-245
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dylA02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.77 62.0 5.75e-01 87.8% 98.9%
2etnB01 1.10.287.180 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain 0.75 62.0 6.19e-01 91.9% 88.2%
1luwA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.75 58.0 6.23e-01 83.8% 96.9%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 60.0 6.04e-01 87.8% 100.0%
3a8pA02 6.10.140.680 Special › Helix non-globular › Helix Hairpins › 0.73 60.0 5.23e-01 90.5% 64.9%
2bdeA03 1.20.58.1160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 53.0 5.27e-01 91.9% 74.0%
3pwfA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.73 56.0 4.61e-01 82.4% 46.6%
1vf7A03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.72 51.0 5.56e-01 75.7% 100.0%
1z0jB00 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.71 46.0 5.34e-01 89.2% 96.1%
3lnnB03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.71 57.0 5.89e-01 87.8% 100.0%
3kdqA00 6.10.320.10 Special › Helix non-globular › Ferritin › 0.70 64.0 5.02e-01 100.0% 96.1%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.70 57.0 5.79e-01 89.2% 93.0%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.69 61.0 5.59e-01 98.6% 76.8%
1wp1B01 1.20.1600.10 Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.69 61.0 3.87e-01 98.6% 22.8%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.69 52.0 5.45e-01 79.7% 90.9%
1h7cA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 61.0 5.47e-01 98.6% 87.4%
1ku9A02 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.69 53.0 5.63e-01 85.1% 98.4%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.69 54.0 4.95e-01 87.8% 88.2%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.69 57.0 5.35e-01 91.9% 78.9%
3l1nA01 6.10.140.790 Special › Helix non-globular › Helix Hairpins › 0.69 44.0 5.13e-01 89.2% 96.1%
1wpaA01 6.10.140.340 Special › Helix non-globular › Helix Hairpins › 0.68 54.0 4.95e-01 86.5% 81.8%
4l8jA04 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.68 50.0 5.41e-01 86.5% 98.3%
1tjlA00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.67 57.0 4.64e-01 95.9% 65.5%
1urfA00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.67 55.0 5.38e-01 90.5% 82.7%
4cqiA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 59.0 5.21e-01 98.6% 82.2%
1hs7A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 55.0 5.04e-01 93.2% 72.2%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.66 53.0 4.71e-01 90.5% 60.9%
1chuA03 1.20.58.100 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.65 51.0 4.87e-01 94.6% 71.6%
2yinA03 1.20.58.740 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C 0.64 56.0 4.74e-01 100.0% 62.5%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.64 49.0 5.12e-01 86.5% 95.5%
1w36B02 1.10.3170.10 Mainly Alpha › Orthogonal Bundle › Recbcd, chain B, domain 2 › Recbcd, chain B, domain 2 0.63 52.0 3.99e-01 93.2% 58.1%
2yf4F00 1.10.3420.10 Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain 0.63 51.0 4.16e-01 90.5% 52.4%
2hujA00 1.20.120.440 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like 0.62 54.0 4.56e-01 98.6% 96.8%
2q5zB00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.62 47.0 4.35e-01 83.8% 64.9%
1e7uA05 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.61 47.0 3.43e-01 81.1% 41.4%
2rdcA00 1.10.287.800 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 0.61 51.0 4.29e-01 94.6% 63.9%
5dn6J00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.59 45.0 4.57e-01 86.5% 87.8%
2q83A02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.58 46.0 3.31e-01 93.2% 28.3%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.56 46.0 4.61e-01 90.5% 89.2%
3ermB00 1.10.10.710 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PSPTO_1197 like 0.56 33.0 3.51e-01 71.6% 67.2%
2lpeA01 6.10.140.1120 Special › Helix non-globular › Helix Hairpins › 0.56 45.0 4.50e-01 98.6% 89.7%
1tqgA00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.55 47.0 4.26e-01 98.6% 100.0%
2icwG02 1.10.10.530 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 0.54 38.0 3.55e-01 73.0% 92.1%
2kseA00 1.20.5.1040 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Sensor protein qsec. 0.54 43.0 4.28e-01 91.9% 83.1%
6pnuB01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.52 42.0 2.89e-01 91.9% 27.7%
1gcvA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 38.0 3.16e-01 79.7% 52.9%
1gcvB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.51 35.0 2.98e-01 73.0% 44.1%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3474564 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.76 65.0 5.74e-01 94.6% 65.7%
4197529 4992.1.1.23 ↗ extended segments › RelB-like › RelB-like › RelB-like › Seryl_tRNA_N 0.75 63.0 5.50e-01 93.2% 61.8%
4038778 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.74 63.0 5.40e-01 93.2% 59.1%
3389928 5054.1.1.59 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 0.73 59.0 4.40e-01 86.5% 90.6%
4401282 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.73 62.0 5.29e-01 93.2% 59.1%
3390311 604.7.1.0 ↗ alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A 0.73 64.0 5.66e-01 98.6% 81.8%
3219995 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.73 56.0 4.42e-01 81.1% 97.2%
3520738 4106.1.1.1 ↗ few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.73 64.0 5.08e-01 100.0% 72.3%
3258925 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.72 59.0 6.03e-01 89.2% 100.0%
4479398 3755.1.1.8 ↗ alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › FliJ 0.72 60.0 4.84e-01 93.2% 74.5%
3488979 192.5.1.0 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.71 63.0 5.35e-01 100.0% 71.2%
3715005 604.8.1.0 ↗ alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo 0.71 62.0 4.84e-01 98.6% 82.5%
3394875 109.4.1.102 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › WAPL 0.70 61.0 3.69e-01 100.0% 26.9%
3551506 4177.1.1.1 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.70 60.0 3.96e-01 95.9% 23.3%
None — 0.70 57.0 4.11e-01 90.5% 33.2%
3937465 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.70 60.0 4.33e-01 95.9% 34.0%
3916884 192.29.1.1 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom 0.70 55.0 5.77e-01 85.1% 98.5%
3408094 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.70 62.0 5.07e-01 98.6% 69.6%
5002349 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.69 54.0 5.70e-01 86.5% 100.0%
4465072 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.69 60.0 5.17e-01 95.9% 61.7%
3832 604.7.1.1 ↗ alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA 0.69 61.0 5.47e-01 98.6% 87.4%
3906696 101.1.2.725 ↗ alpha arrays › HTH › HTH › winged helix domain › TAPR1-like 0.69 57.0 4.94e-01 95.9% 57.5%
3546710 3291.1.1.200 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › TAPR1-like 0.69 56.0 4.64e-01 90.5% 52.6%
3742115 9.26.1.0 ↗ beta barrels › Lipocalins/Streptavidin 0.69 48.0 3.57e-01 73.0% 33.2%
3172350 4177.1.1.7 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Pil1 0.69 56.0 4.04e-01 89.2% 31.9%
3928718 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.69 56.0 4.62e-01 91.9% 51.4%
5066959 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.69 55.0 3.99e-01 89.2% 53.5%
3945620 5086.1.1.85 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AAEA_pHBA 0.68 57.0 5.36e-01 93.2% 76.7%
4543996 3600.1.1.1 ↗ alpha bundles › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › YlqD 0.68 56.0 5.06e-01 91.9% 71.4%
3719904 148.1.3.13 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_9 0.68 56.0 3.59e-01 91.9% 18.6%
3079196 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.68 59.0 5.46e-01 95.9% 84.0%
4010706 1.1.7.98 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25876 0.68 56.0 5.78e-01 94.6% 98.6%
3611632 192.7.1.0 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.68 53.0 4.81e-01 90.5% 63.0%
3627448 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.67 54.0 4.77e-01 89.2% 65.5%
4607154 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.67 54.0 4.48e-01 90.5% 53.3%
4016292 192.2.1.18 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING 0.66 53.0 4.46e-01 90.5% 85.9%
3213526 192.5.1.14 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA 0.66 55.0 4.97e-01 93.2% 83.8%
3728035 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.66 57.0 4.80e-01 95.9% 64.0%
3402327 3755.3.1.324 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF725 0.66 55.0 4.22e-01 91.9% 40.0%
3079134 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.66 56.0 3.71e-01 95.9% 22.5%
5019215 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.65 53.0 3.57e-01 91.9% 23.2%
3527324 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.65 51.0 4.38e-01 89.2% 52.0%
3971109 5086.1.1.85 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AAEA_pHBA 0.64 50.0 5.01e-01 87.8% 97.3%
3414399 5086.1.1.106 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF725 0.63 51.0 3.96e-01 89.2% 46.5%
3635960 601.19.1.18 ↗ alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Mmc1_C 0.63 52.0 3.49e-01 90.5% 69.1%
4949876 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.63 48.0 5.03e-01 87.8% 98.5%
2067201 5086.1.1.84 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND 0.62 50.0 5.02e-01 94.6% 89.6%
5052557 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.61 48.0 3.70e-01 91.9% 87.7%
3940232 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.59 49.0 4.48e-01 95.9% 82.9%
3626248 5054.1.1.8 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.58 48.0 3.46e-01 91.9% 34.1%
4489485 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.57 48.0 3.63e-01 98.6% 72.3%