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hypothetical_protein_pneo_cds_414
Euk-VirPandoravirus_neocaledonia
hypothetical_protein_pneo_cds_414__YP_009482024__Pandoravirus_neocaledonia__2107708
Identity
- Accession:
- YP_009482024 ↗
- Protein ID:
- hypothetical_protein_pneo_cds_414
- Kingdom:
- euk
Quality
77.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 40-197
Domain cluster:
rep: S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__01041__D28-149
D2
high
residues 199-289
D3
high
residues 403-494
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2co8A00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.52 | 34.0 | 3.56e-01 | 98.9% | 74.4% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3532833 | 389.1.1.1 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF | 0.56 | 37.0 | 4.00e-01 | 70.7% | 78.8% |
| 3511189 | 389.1.1.130 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_CA, cEGF, EGF_3 | 0.56 | 35.0 | 4.01e-01 | 80.4% | 84.3% |