hypothetical_protein_pneo_cds_435

Euk-Vir

Pandoravirus_neocaledonia

hypothetical_protein_pneo_cds_435__YP_009482045__Pandoravirus_neocaledonia__2107708

Identity

74.4 mean pLDDT

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

View cluster (53 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 248-311

PDB

Domain cluster: rep: hypothetical_protein_psal_cds_895__YP_009430090__Pandoravirus_salinus__1349410__D186-270

D2 medium residues 472-533

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3hhsA01	1.20.1370.10	Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Hemocyanin, N-terminal domain	0.63	49.0	3.79e-01	85.5%	76.6%
3axjB02	1.20.58.200	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2	0.61	47.0	4.23e-01	82.3%	81.2%
2ra1A03	1.20.58.770	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.61	47.0	4.74e-01	85.5%	90.5%
6xxvC00	1.10.132.20	Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor	0.60	43.0	3.65e-01	77.4%	81.1%
1te4A01	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.59	51.0	4.60e-01	100.0%	75.3%
1q2lA04	3.30.830.10	Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like	0.54	41.0	2.83e-01	82.3%	46.1%
1kt1A03	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.53	44.0	3.42e-01	100.0%	57.6%
5jnmA02	1.10.1040.10	Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2	0.51	40.0	3.11e-01	98.4%	92.5%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3570870	6140.1.1.3 ↗	alpha superhelices › Cdc45-Binding Domain in Sld3/Treslin › Cdc45-Binding Domain in Sld3/Treslin › Cdc45-Binding Domain in Sld3/Treslin › Treslin_STD	0.62	52.0	3.86e-01	98.4%	81.7%
4638215	101.35.1.4 ↗	alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3	0.58	40.0	4.42e-01	72.6%	94.0%
4513616	3198.1.1.1 ↗	alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA	0.58	40.0	3.08e-01	83.9%	34.6%
4297679	101.1.1.45 ↗	alpha arrays › HTH › HTH › Three-helical HTH › BrxA	0.52	36.0	3.60e-01	74.2%	78.5%