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hypothetical_protein_pneo_cds_449
Euk-VirPandoravirus_neocaledonia
hypothetical_protein_pneo_cds_449__YP_009482059__Pandoravirus_neocaledonia__2107708
Identity
- Accession:
- YP_009482059 ↗
- Protein ID:
- hypothetical_protein_pneo_cds_449
- Kingdom:
- euk
Quality
60.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-61
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.60 | 45.0 | 4.07e-01 | 83.6% | 91.0% |
| 1upkA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.59 | 50.0 | 3.23e-01 | 100.0% | 27.8% |
| 3mabA00 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.53 | 39.0 | 3.58e-01 | 83.6% | 80.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3999928 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.74 | 61.0 | 5.90e-01 | 93.4% | 100.0% |
| 5071067 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.61 | 50.0 | 3.38e-01 | 95.1% | 68.6% |
| 5053071 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.59 | 44.0 | 3.20e-01 | 83.6% | 81.1% |
| 4403739 | 604.39.1.12 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › VTT_dom | 0.57 | 42.0 | 3.17e-01 | 82.0% | 33.5% |
| 4436111 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.56 | 47.0 | 3.30e-01 | 100.0% | 89.6% |
| 4379330 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.54 | 37.0 | 3.76e-01 | 75.4% | 86.7% |
| 4577904 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.52 | 36.0 | 3.37e-01 | 75.4% | 77.5% |