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hypothetical_protein_pneo_cds_507
Euk-VirPandoravirus_neocaledonia
hypothetical_protein_pneo_cds_507__YP_009482117__Pandoravirus_neocaledonia__2107708
Identity
- Accession:
- YP_009482117 ↗
- Protein ID:
- hypothetical_protein_pneo_cds_507
- Kingdom:
- euk
Quality
83.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 53-139
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eu9C00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.85 | 79.0 | 5.67e-01 | 100.0% | 47.8% |
| 5eidA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.85 | 79.0 | 6.92e-01 | 100.0% | 86.2% |
| 2ajaA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.83 | 76.0 | 5.01e-01 | 100.0% | 31.2% |
| 4hi8A00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.83 | 77.0 | 6.06e-01 | 100.0% | 62.9% |
| 6jd6B00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.83 | 76.0 | 5.79e-01 | 100.0% | 55.2% |
| 3utmA02 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.82 | 76.0 | 6.53e-01 | 100.0% | 81.7% |
| 4cymD00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.81 | 75.0 | 5.95e-01 | 100.0% | 65.3% |
| 3twqA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.81 | 74.0 | 5.92e-01 | 100.0% | 82.9% |
| 5z2mB00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.80 | 73.0 | 6.24e-01 | 100.0% | 83.2% |
| 3ehrA02 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.80 | 73.0 | 6.59e-01 | 100.0% | 90.5% |
| 6ghmC01 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.79 | 72.0 | 6.21e-01 | 100.0% | 78.4% |
| 1k1aA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.78 | 71.0 | 5.16e-01 | 100.0% | 50.0% |
| 1ihbA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.75 | 69.0 | 5.61e-01 | 100.0% | 65.4% |
| 3woyA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.64 | 55.0 | 4.03e-01 | 96.6% | 48.0% |
| 3d7iB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.63 | 45.0 | 4.34e-01 | 73.6% | 99.0% |
| 4id0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 40.0 | 3.75e-01 | 71.3% | 95.5% |
| 4dloB02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 45.0 | 4.09e-01 | 87.4% | 94.0% |
| 1rz4A01 | 1.25.40.250 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat; domain 1 | 0.55 | 48.0 | 4.35e-01 | 98.9% | 79.2% |
| 4aciA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 42.0 | 3.42e-01 | 82.8% | 88.6% |
| 4kvmA02 | 1.25.40.1010 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 44.0 | 3.47e-01 | 100.0% | 92.1% |
| 1ybzA00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.51 | 28.0 | 2.99e-01 | 74.7% | 57.9% |
| 5d1rB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.50 | 42.0 | 3.21e-01 | 96.6% | 70.4% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3259472 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.85 | 77.0 | 6.69e-01 | 96.6% | 72.0% |
| 3267273 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.85 | 79.0 | 7.09e-01 | 100.0% | 79.1% |
| 3171227 | 109.3.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 | 0.84 | 78.0 | 5.68e-01 | 100.0% | 46.8% |
| 3748383 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.83 | 77.0 | 5.54e-01 | 100.0% | 44.3% |
| 3272965 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.82 | 76.0 | 7.06e-01 | 100.0% | 83.8% |
| 3695738 | 109.3.1.232 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_KRIT1 | 0.81 | 75.0 | 4.72e-01 | 100.0% | 26.2% |
| 3736928 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.81 | 74.0 | 6.47e-01 | 98.9% | 75.2% |
| 3259554 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.81 | 74.0 | 5.36e-01 | 100.0% | 40.0% |
| 3198211 | 109.3.1.347 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_KRIT1 | 0.81 | 74.0 | 4.83e-01 | 100.0% | 29.4% |
| 4572420 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.80 | 73.0 | 4.86e-01 | 100.0% | 34.2% |
| 3733564 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.79 | 72.0 | 6.62e-01 | 100.0% | 86.4% |
| 3251931 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.78 | 69.0 | 4.76e-01 | 96.6% | 36.4% |
| 3267275 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.78 | 71.0 | 5.47e-01 | 100.0% | 61.1% |
| 3248202 | 109.3.1.10 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_4 | 0.77 | 69.0 | 5.46e-01 | 100.0% | 65.7% |
| 3787982 | 109.4.1.2372 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28949 | 0.75 | 67.0 | 4.67e-01 | 98.9% | 46.1% |
| 3254410 | 109.3.1.10 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_4 | 0.70 | 62.0 | 5.55e-01 | 100.0% | 71.2% |
| 3701336 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 54.0 | 4.55e-01 | 87.4% | 60.7% |
| 3665947 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.68 | 56.0 | 4.91e-01 | 92.0% | 88.1% |
| 3672466 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.66 | 58.0 | 3.65e-01 | 100.0% | 20.2% |
| 3376266 | 109.4.1.1271 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 | 0.64 | 56.0 | 3.66e-01 | 100.0% | 25.5% |
| 3824815 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.64 | 57.0 | 4.58e-01 | 100.0% | 77.7% |
| 3423632 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.64 | 56.0 | 3.68e-01 | 100.0% | 29.1% |
| 3332548 | 109.4.1.1282 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, TPR_24 | 0.64 | 55.0 | 3.46e-01 | 98.9% | 20.6% |
| 3655480 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.64 | 56.0 | 4.29e-01 | 100.0% | 67.1% |
| 3803691 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.63 | 55.0 | 4.16e-01 | 100.0% | 48.0% |
| 3806322 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.62 | 53.0 | 4.93e-01 | 97.7% | 86.1% |
| 3312932 | 109.4.1.1296 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long, TPR_24 | 0.62 | 55.0 | 3.58e-01 | 100.0% | 26.3% |
| 3826382 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.62 | 54.0 | 4.94e-01 | 100.0% | 84.2% |
| 3193777 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.62 | 49.0 | 3.81e-01 | 88.5% | 47.8% |
| 3366458 | 109.4.1.3005 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, DYW_deaminase | 0.61 | 53.0 | 3.48e-01 | 100.0% | 24.7% |
| 3314796 | 109.4.1.1277 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 | 0.61 | 53.0 | 3.89e-01 | 97.7% | 41.6% |
| 3431787 | 109.4.1.1262 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long | 0.61 | 53.0 | 4.31e-01 | 100.0% | 58.3% |
| 3312486 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.60 | 52.0 | 4.27e-01 | 100.0% | 61.7% |
| 3828676 | 109.4.1.1257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 | 0.60 | 50.0 | 4.76e-01 | 93.1% | 85.7% |
| 3320740 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.60 | 51.0 | 4.27e-01 | 100.0% | 58.2% |
| 3311548 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.60 | 52.0 | 4.57e-01 | 100.0% | 71.1% |
| 3374152 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.59 | 50.0 | 4.55e-01 | 100.0% | 73.6% |
| 3381954 | 109.4.1.1610 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, E_motif | 0.58 | 50.0 | 3.10e-01 | 100.0% | 17.7% |
| 3717107 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 47.0 | 3.40e-01 | 94.3% | 44.4% |
| 3328279 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.55 | 47.0 | 4.56e-01 | 100.0% | 93.0% |
| 3183168 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.54 | 45.0 | 2.96e-01 | 100.0% | 29.8% |