←Back to structures

hypothetical_protein_pneo_cds_574

Euk-Vir

Pandoravirus_neocaledonia

hypothetical_protein_pneo_cds_574__YP_009482184__Pandoravirus_neocaledonia__2107708

Identity

Accession:
YP_009482184 ↗
Protein ID:
hypothetical_protein_pneo_cds_574
Kingdom:
euk

Quality

75.2 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

Cluster

View cluster (44 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-185
PDB
Domain cluster: rep: hypothetical_protein_pmac_cds_359__YP_009481043__Pandoravirus_macleodensis__2107707__D58-179
D2 high residues 219-378
PDB
Domain cluster: rep: hypothetical_protein_TW95_gp1591__YP_009120560__Pandoravirus_inopinatum__1605721__D181-198_210-259_277-315_339-420
D3 high residues 394-504
PDB
Domain cluster: rep: hypothetical_protein_pneo_cds_529__YP_009482139__Pandoravirus_neocaledonia__2107708__D177-292
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gzcA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 44.0 4.22e-01 82.9% 90.2%
3onkA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 43.0 4.06e-01 81.1% 85.4%
4xaxB02 1.20.58.1290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain 0.56 40.0 4.24e-01 84.7% 82.8%
2rkkA01 1.25.40.270 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 0.56 40.0 3.58e-01 73.9% 94.9%
1vdyA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.55 42.0 3.98e-01 83.8% 89.3%
1xx1A00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.55 39.0 2.91e-01 73.9% 66.0%
1f5mA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.54 39.0 3.42e-01 75.7% 93.2%
4eadA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.54 41.0 4.23e-01 82.9% 85.0%
3zukA01 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.53 39.0 2.89e-01 79.3% 85.4%
1ug3A02 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 40.0 3.90e-01 94.6% 72.7%
3pasA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 38.0 3.27e-01 80.2% 84.2%
4iluA02 1.20.58.1290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain 0.51 38.0 3.88e-01 100.0% 80.2%
3zojA00 1.20.1080.10 Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. 0.50 39.0 3.07e-01 85.6% 65.8%
6y4rA01 1.25.40.590 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type IV / VI secretion system, DotU 0.50 42.0 3.84e-01 94.6% 70.5%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3594006 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 47.0 3.10e-01 80.2% 36.9%
3322282 109.4.1.21 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ENTH 0.59 46.0 4.00e-01 83.8% 69.7%
1316898 532.2.1.5 ↗ alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains › T3SS_CopN_3rd 0.57 40.0 4.07e-01 73.0% 93.7%
3324665 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.57 42.0 3.21e-01 77.5% 77.4%
3732131 109.4.1.21 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ENTH 0.57 44.0 3.86e-01 84.7% 69.7%
4002215 109.4.1.401 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NRDE-2 0.54 41.0 2.45e-01 84.7% 10.2%
1157930 101.1.1.87 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CarD_C 0.54 39.0 4.13e-01 91.9% 85.4%
6844 223.1.1.3 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.54 39.0 3.42e-01 75.7% 93.2%
4959994 5048.1.1.1 ↗ alpha complex topology › Aquaporin-like › Aquaporin-like › Aquaporin-like › MIP 0.54 39.0 3.07e-01 76.6% 89.4%
3730991 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.54 44.0 2.90e-01 88.3% 87.9%
3405087 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 41.0 3.49e-01 81.1% 74.1%
401062 5048.1.1.1 ↗ alpha complex topology › Aquaporin-like › Aquaporin-like › Aquaporin-like › MIP 0.53 38.0 3.01e-01 76.6% 91.5%
3355292 601.1.1.66 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › At5g52880_ARM 0.51 39.0 4.00e-01 82.9% 92.7%
4140470 3281.1.1.1 ↗ alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.50 43.0 2.92e-01 100.0% 51.9%