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hypothetical_protein_pneo_cds_590

Euk-Vir

Pandoravirus_neocaledonia

hypothetical_protein_pneo_cds_590__YP_009482200__Pandoravirus_neocaledonia__2107708

Identity

Accession:
YP_009482200 ↗
Protein ID:
hypothetical_protein_pneo_cds_590
Kingdom:
euk

Quality

53.8 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

Cluster

View cluster (16 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 66-80_142-204_221-310_367-449
PDB
D2 medium residues 205-220_311-366_450-461
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19559.7 best DUF6081 36.1 6.20e-09 88.1% 19.9%
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3immA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.69 59.0 4.44e-01 92.9% 79.7%
2rh0A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 32.0 3.58e-01 70.2% 59.4%
3cxbA01 3.30.2440.10 Alpha Beta › 2-Layer Sandwich › Secreted effector protein SifA fold › Secreted effector protein SifA 0.63 37.0 3.29e-01 77.4% 42.6%
4ba0A01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.63 43.0 3.33e-01 71.4% 91.0%
4dixA02 2.30.29.140 Mainly Beta › Roll › PH-domain like › 0.60 41.0 3.63e-01 71.4% 92.0%
1mveA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 53.0 3.74e-01 95.2% 67.8%
3qijB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 42.0 4.13e-01 72.6% 97.8%
1xjaB00 2.60.120.280 Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC 0.59 32.0 2.66e-01 98.8% 27.9%
1e2tA02 3.30.1120.150 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.59 41.0 4.12e-01 85.7% 70.9%
5dzeA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 52.0 3.92e-01 100.0% 61.3%
3vv1A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 48.0 4.04e-01 91.7% 85.8%
6bm0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 43.0 2.76e-01 79.8% 27.1%
6n44A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 48.0 3.99e-01 90.5% 90.6%
5nldB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 50.0 4.24e-01 97.6% 94.9%
2w18A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 47.0 3.15e-01 90.5% 93.8%
3ap9A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 3.91e-01 92.9% 86.1%
3zsjA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 4.02e-01 92.9% 93.5%
2wsuB02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 49.0 4.07e-01 96.4% 97.2%
1a78A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 47.0 3.99e-01 90.5% 92.5%
3zxfA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 47.0 3.95e-01 90.5% 91.9%
5gm0A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 48.0 4.00e-01 97.6% 90.5%
7b2sA01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.54 46.0 3.76e-01 92.9% 66.5%
4ym3C00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 3.89e-01 94.0% 75.0%
2jj6A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 3.96e-01 94.0% 81.3%
5xrkA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 47.0 3.91e-01 94.0% 91.5%
2rgnB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 40.0 3.50e-01 77.4% 77.2%
1w2tA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.54 46.0 3.94e-01 94.0% 83.6%
2jd4A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 3.52e-01 91.7% 78.4%
4jqtA01 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.53 45.0 3.52e-01 97.6% 57.2%
2wsuA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.77e-01 91.7% 91.4%
2h0bC00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.50e-01 92.9% 75.4%
5d3xB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 39.0 3.31e-01 78.6% 89.4%
3v9fA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 42.0 2.93e-01 89.3% 93.2%
4eqvA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.52 45.0 3.52e-01 94.0% 85.8%
2z0qA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 39.0 3.41e-01 79.8% 84.4%
5vxzA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 3.55e-01 98.8% 61.7%
1fblA02 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.52 42.0 3.27e-01 89.3% 77.0%
4agrB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 3.72e-01 96.4% 78.5%
1h4rA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 38.0 3.69e-01 77.4% 90.1%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 36.0 3.63e-01 73.8% 87.4%
3nvnA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 40.0 2.72e-01 89.3% 94.8%
1nr0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 39.0 2.75e-01 85.7% 72.5%
1mi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 37.0 3.44e-01 77.4% 92.4%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3388925 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.66 33.0 3.18e-01 70.2% 40.0%
4275082 10.1.1.11 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 0.62 54.0 3.76e-01 94.0% 66.2%
3271259 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.62 41.0 4.11e-01 85.7% 67.1%
3945385 219.1.1.6 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.62 39.0 3.02e-01 82.1% 29.4%
None — 0.61 43.0 4.01e-01 73.8% 83.8%
3676806 220.1.1.45 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SCAB-PH 0.61 41.0 3.67e-01 70.2% 100.0%
3940470 5.1.4.320 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_LRRK2 0.61 48.0 3.11e-01 85.7% 69.4%
3662606 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.61 53.0 3.83e-01 94.0% 57.3%
3496370 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 43.0 3.70e-01 73.8% 67.7%
None — 0.60 41.0 3.56e-01 71.4% 66.2%
None — 0.59 42.0 3.88e-01 73.8% 82.9%
3666912 220.1.1.45 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SCAB-PH 0.59 40.0 3.39e-01 71.4% 81.4%
4487949 220.1.1.69 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Meiotic_rec114 0.59 40.0 3.56e-01 71.4% 95.0%
None — 0.58 41.0 3.54e-01 73.8% 67.7%
4960109 10.1.1.21 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › 3keto-disac_hyd 0.58 50.0 3.59e-01 92.9% 57.8%
3475699 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.57 41.0 3.79e-01 73.8% 82.9%
3909375 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.57 40.0 3.43e-01 73.8% 65.2%
3235681 5.1.4.36 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.57 47.0 2.90e-01 88.1% 78.6%
1406536 5.1.4.21 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 0.57 47.0 3.12e-01 89.3% 89.0%
3997948 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.57 48.0 3.91e-01 92.9% 85.2%
3451821 5.1.4.169 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.56 47.0 2.99e-01 89.3% 90.4%
3472304 10.1.1.1 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.56 48.0 3.54e-01 91.7% 87.8%
4106342 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.56 43.0 4.19e-01 79.8% 91.1%
3269121 220.1.1.20 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.56 42.0 3.85e-01 79.8% 85.5%
3740871 5.1.4.36 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.56 40.0 2.52e-01 82.1% 14.8%
3487656 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 39.0 3.80e-01 73.8% 92.6%
3901785 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.56 47.0 3.50e-01 91.7% 63.9%
3502064 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.56 47.0 4.03e-01 90.5% 96.1%
3991490 5.1.4.48 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BBS1 0.56 45.0 2.88e-01 88.1% 87.6%
3508282 5.1.4.169 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.56 46.0 2.93e-01 88.1% 88.2%
3798404 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.56 47.0 3.95e-01 94.0% 90.3%
3193239 5.1.4.38 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.55 45.0 2.78e-01 85.7% 93.1%
3480422 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 39.0 3.31e-01 72.6% 84.4%
3701280 5.1.4.313 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_BBS7 0.55 44.0 2.88e-01 84.5% 38.8%
3472821 5.1.4.48 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BBS1 0.55 45.0 2.87e-01 88.1% 86.7%
3785609 5.1.4.661 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st 0.55 44.0 2.91e-01 85.7% 54.5%
3991202 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.55 47.0 3.95e-01 94.0% 74.3%
3501831 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 48.0 3.58e-01 96.4% 71.7%
3936024 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 45.0 3.04e-01 90.5% 94.8%
4027712 220.1.1.287 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26279 0.54 40.0 3.58e-01 78.6% 90.0%
3512816 5.1.4.313 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_BBS7 0.54 43.0 2.79e-01 84.5% 37.4%
3734385 5.1.4.38 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.54 44.0 2.78e-01 86.9% 92.9%
3994733 5.1.3.209 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_BBS7 0.54 43.0 2.85e-01 85.7% 55.8%
3221746 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.54 44.0 3.20e-01 90.5% 69.6%
3927191 633.23.1.4 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 0.54 45.0 3.25e-01 91.7% 70.2%
3916301 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.53 45.0 3.95e-01 94.0% 79.2%
3788776 5.1.4.38 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.53 43.0 2.88e-01 86.9% 93.4%
3515797 5.1.4.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.53 43.0 2.89e-01 85.7% 54.0%
4592810 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 42.0 2.89e-01 84.5% 44.2%
3785928 220.1.1.245 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29445 0.53 44.0 3.49e-01 89.3% 75.3%
3394866 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.53 46.0 3.32e-01 92.9% 80.4%
3769060 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.53 45.0 3.39e-01 91.7% 69.7%
3991735 9.1.1.49 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7043 0.53 43.0 3.88e-01 89.3% 97.4%
3254787 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 38.0 3.21e-01 75.0% 68.1%
3939513 633.23.1.5 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like 0.52 44.0 3.20e-01 95.2% 88.6%
163818 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 39.0 3.56e-01 77.4% 91.6%
3484745 5.1.4.313 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_BBS7 0.52 42.0 2.79e-01 85.7% 48.9%
3267847 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 42.0 2.96e-01 89.3% 97.1%
3783578 5.1.5.10 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › ANAPC4_WD40 0.52 38.0 2.69e-01 78.6% 87.4%
3573635 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.52 43.0 3.55e-01 94.0% 65.6%
5048388 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.52 42.0 3.72e-01 86.9% 79.2%
3557192 5.1.4.48 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BBS1 0.52 42.0 2.74e-01 88.1% 73.7%
3537300 5.1.4.313 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_BBS7 0.52 41.0 2.77e-01 85.7% 54.2%
3857490 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 41.0 3.63e-01 86.9% 97.6%
4028176 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 38.0 3.49e-01 78.6% 89.1%
4889001 5.1.4.280 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40, Beta-prop_WDR36-Utp21_1st 0.51 40.0 2.72e-01 86.9% 80.7%
5079209 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 39.0 3.23e-01 82.1% 80.7%
3596151 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.50 39.0 3.65e-01 83.3% 86.7%
3936845 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.50 41.0 3.46e-01 94.0% 65.8%