hypothetical_protein_pneo_cds_625

Euk-Vir

Pandoravirus_neocaledonia

hypothetical_protein_pneo_cds_625__YP_009482235__Pandoravirus_neocaledonia__2107708

Identity

61.5 mean pLDDT

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

View cluster (27 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 378-465_518-574

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6grrB01	3.30.457.10	Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain	0.62	34.0	4.38e-01	90.3%	96.2%
7pthC01	3.40.720.10	Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A	0.55	42.0	2.94e-01	78.6%	88.4%
4ntqB00	3.30.2450.20	Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold ›	0.54	39.0	3.94e-01	74.5%	92.4%
1z94B00	3.30.530.20	Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain	0.51	39.0	3.94e-01	91.0%	81.1%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3215166	3180.1.1.0 ↗	a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related	0.55	28.0	3.41e-01	75.9%	73.7%
3695635	243.3.1.0 ↗	a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin	0.53	33.0	4.13e-01	78.6%	100.0%
3222216	12.1.1.0 ↗	beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain	0.52	27.0	3.68e-01	79.3%	100.0%
5042979	241.1.1.30 ↗	a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF26556	0.52	47.0	4.70e-01	100.0%	98.0%
5061240	241.1.1.30 ↗	a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF26556	0.52	45.0	4.61e-01	96.6%	97.1%
3816060	11.1.4.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like	0.50	44.0	4.47e-01	97.2%	97.9%

D2 medium residues 255-375

PDB

Domain cluster: rep: hypothetical_protein_pqer_cds_790__YP_009483481__Pandoravirus_quercus__2107709__D98-270

D3 medium residues 581-661_815-842

PDB

Domain cluster: rep: hypothetical_protein_psal_cds_1113__YP_008438423__Pandoravirus_salinus__1349410__D513-575_751-784

D4 medium residues 662-691_711-814

PDB

Domain cluster: rep: hypothetical_protein_psal_cds_864__YP_008438002__Pandoravirus_salinus__1349410__D468-489_547-758