hypothetical_protein_pneo_cds_628

Euk-Vir

Pandoravirus_neocaledonia

hypothetical_protein_pneo_cds_628__YP_009482238__Pandoravirus_neocaledonia__2107708

Identity

56.8 mean pLDDT

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

View cluster (12 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 69-147_224-234_247-292

PDB

D2 medium residues 293-424_440-467_494-531

PDB

D3 medium residues 468-493_532-565

PDB

D4 medium residues 566-642_706-796

PDB

Domain cluster: rep: hypothetical_protein_psal_cds_864__YP_008438002__Pandoravirus_salinus__1349410__D468-489_547-758

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2zxkA00	3.40.1500.20	Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase ›	0.65	52.0	4.49e-01	97.6%	54.1%
3n8bA00	3.10.450.700	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.59	28.0	4.06e-01	93.5%	100.0%
4puxA00	2.40.160.20	Mainly Beta › Beta Barrel › Porin ›	0.56	32.0	3.29e-01	79.8%	58.6%
2xzmE01	3.30.160.20	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain ›	0.54	25.0	2.96e-01	71.4%	59.5%
2vf9A00	3.30.380.10	Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein	0.53	28.0	3.20e-01	88.1%	66.4%
1n9eA01	2.70.98.20	Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain	0.53	42.0	3.08e-01	86.3%	73.6%
6yfiB01	3.30.380.10	Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein	0.51	31.0	3.48e-01	97.0%	75.6%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3783000	243.3.1.0 ↗	a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin	0.66	30.0	3.97e-01	79.2%	75.8%
3250629	4210.1.1.1 ↗	a+b two layers › WGR domain › WGR domain › WGR domain › WGR	0.66	34.0	4.19e-01	83.9%	78.1%
3288634	218.1.1.1 ↗	a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N	0.64	27.0	3.39e-01	97.6%	63.0%
163996	218.1.1.1 ↗	a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N	0.62	29.0	3.25e-01	95.2%	54.7%
3970041	218.1.1.0 ↗	a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like	0.57	28.0	3.37e-01	70.8%	68.7%
4963799	218.1.1.1 ↗	a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N	0.55	27.0	3.39e-01	70.2%	74.3%
3736685	881.1.1.0 ↗	a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like	0.52	36.0	3.64e-01	71.4%	82.4%