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hypothetical_protein_pneo_cds_765
Euk-VirPandoravirus_neocaledonia
hypothetical_protein_pneo_cds_765__YP_009482375__Pandoravirus_neocaledonia__2107708
Identity
- Accession:
- YP_009482375 ↗
- Protein ID:
- hypothetical_protein_pneo_cds_765
- Kingdom:
- euk
Quality
62.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 189-305
D2
medium
residues 26-184
D3
medium
residues 379-448
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gxwC00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 40.0 | 3.65e-01 | 82.9% | 93.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4091216 | 3844.2.1.2 ↗ | a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › DUF5081 | 0.70 | 53.0 | 3.75e-01 | 81.4% | 51.7% |
| 4309285 | 3844.2.1.2 ↗ | a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › DUF5081 | 0.68 | 52.0 | 3.86e-01 | 82.9% | 47.0% |
| 3971603 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.67 | 56.0 | 3.73e-01 | 94.3% | 26.1% |
| 3466927 | 4.2.1.4 ↗ | beta barrels › SH3 › SAND › SAND › TDBD | 0.61 | 48.0 | 4.49e-01 | 87.1% | 90.0% |
| 3738846 | 633.23.1.12 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Fig1 | 0.59 | 42.0 | 3.02e-01 | 75.7% | 68.0% |
| 4060774 | 219.1.1.63 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › TGL | 0.59 | 44.0 | 3.11e-01 | 84.3% | 27.6% |
| 3802019 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.54 | 44.0 | 3.16e-01 | 90.0% | 60.5% |
| 3992801 | 11.1.1.532 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C6 | 0.54 | 40.0 | 3.68e-01 | 78.6% | 96.7% |
| 5034254 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.52 | 40.0 | 4.13e-01 | 94.3% | 92.3% |
| 5009920 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.52 | 43.0 | 2.90e-01 | 98.6% | 37.8% |
| 3968712 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 44.0 | 4.26e-01 | 100.0% | 92.5% |
D4
medium
residues 504-568_589-691