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hypothetical_protein_pneo_cds_800
Euk-VirPandoravirus_neocaledonia
hypothetical_protein_pneo_cds_800__YP_009482410__Pandoravirus_neocaledonia__2107708
Identity
- Accession:
- YP_009482410 ↗
- Protein ID:
- hypothetical_protein_pneo_cds_800
- Kingdom:
- euk
Quality
81.9
mean pLDDT
Cluster
View cluster (60 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 298-424
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1n11A00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.82 | 76.0 | 5.21e-01 | 100.0% | 35.4% |
| 4u2xF00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.64 | 56.0 | 5.10e-01 | 98.4% | 94.3% |
| 1upkA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.61 | 54.0 | 4.15e-01 | 100.0% | 62.9% |
| 3vldA02 | 1.25.40.580 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 52.0 | 4.89e-01 | 92.9% | 90.8% |
| 5mj6A04 | 1.25.50.20 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › | 0.60 | 53.0 | 4.00e-01 | 100.0% | 43.8% |
| 1sqmA04 | 1.25.40.320 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal domain | 0.59 | 52.0 | 4.95e-01 | 99.2% | 91.3% |
| 3vtxB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 50.0 | 4.54e-01 | 100.0% | 73.2% |
| 5ctrA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 46.0 | 3.61e-01 | 96.1% | 49.5% |
| 4abnA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 45.0 | 3.58e-01 | 100.0% | 62.7% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3271428 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.75 | 68.0 | 5.15e-01 | 100.0% | 57.3% |
| 3250526 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.74 | 67.0 | 5.59e-01 | 100.0% | 66.8% |
| 3730189 | 109.3.1.233 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF7104 | 0.69 | 62.0 | 5.18e-01 | 100.0% | 58.2% |
| 3672658 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 51.0 | 5.15e-01 | 90.6% | 91.5% |
| 3925443 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 51.0 | 4.97e-01 | 95.3% | 95.0% |
| 3507403 | 109.4.1.158 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ERAP1_C | 0.59 | 53.0 | 4.02e-01 | 100.0% | 45.8% |
D2
medium
residues 425-524
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hreA03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.56 | 41.0 | 4.42e-01 | 88.0% | 88.5% |
| 1yy7A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 39.0 | 3.84e-01 | 72.0% | 95.2% |
| 4evfA03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.55 | 41.0 | 4.45e-01 | 91.0% | 97.5% |
| 2qebA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.54 | 40.0 | 3.58e-01 | 94.0% | 54.5% |
| 1sxjE03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.52 | 38.0 | 3.87e-01 | 91.0% | 78.4% |
| 3otiA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 43.0 | 3.38e-01 | 92.0% | 85.5% |
| 2pl2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 43.0 | 3.53e-01 | 94.0% | 58.2% |
| 2ovjA00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.50 | 38.0 | 3.13e-01 | 82.0% | 71.1% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4542889 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.70 | 59.0 | 4.42e-01 | 99.0% | 36.8% |
| 4016313 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.66 | 59.0 | 4.19e-01 | 99.0% | 34.2% |
| 3254885 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.64 | 57.0 | 5.62e-01 | 99.0% | 93.3% |
| 3926487 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.62 | 52.0 | 5.17e-01 | 94.0% | 100.0% |
| 3474837 | 109.4.1.1616 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Trm732_C | 0.58 | 49.0 | 4.19e-01 | 95.0% | 94.1% |
| 3248106 | 176.1.1.1 ↗ | alpha arrays › Annexin › Annexin › Annexin › Annexin | 0.54 | 40.0 | 4.27e-01 | 87.0% | 92.9% |
| 4218333 | 531.1.1.1 ↗ | alpha arrays › Domains of FliG › C-terminal domain of FliG › C-terminal domain of FliG › FliG_C | 0.53 | 37.0 | 3.31e-01 | 72.0% | 62.1% |