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hypothetical_protein_pneo_cds_836
Euk-VirPandoravirus_neocaledonia
hypothetical_protein_pneo_cds_836__YP_009482446__Pandoravirus_neocaledonia__2107708
Identity
- Accession:
- YP_009482446 ↗
- Protein ID:
- hypothetical_protein_pneo_cds_836
- Kingdom:
- euk
Quality
59.8
mean pLDDT
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 83-194
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1oaiA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.51 | 24.0 | 2.97e-01 | 86.6% | 72.9% |
| 2xu8A00 | 3.90.70.190 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Domain of unknown function (DUF5086) | 0.51 | 32.0 | 3.20e-01 | 81.2% | 59.5% |
| 7bysA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 44.0 | 3.25e-01 | 95.5% | 75.6% |
| 2ejsA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.50 | 25.0 | 3.13e-01 | 95.5% | 84.5% |
| 2damA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.50 | 23.0 | 2.79e-01 | 88.4% | 64.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3179593 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.68 | 61.0 | 5.98e-01 | 95.5% | 99.2% |
| 3368577 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.63 | 29.0 | 3.71e-01 | 86.6% | 73.8% |
| 3927627 | 3775.1.1.1 ↗ | beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › CD36 | 0.56 | 45.0 | 3.06e-01 | 86.6% | 90.0% |
| 3230984 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.56 | 49.0 | 4.55e-01 | 99.1% | 77.1% |
| 4940142 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.54 | 29.0 | 3.28e-01 | 70.5% | 67.1% |
| 4392321 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.52 | 32.0 | 3.34e-01 | 79.5% | 64.8% |
| 146637 | 4.24.1.1 ↗ | beta barrels › SH3 › PA1645 › PA1645 › DUF5086 | 0.51 | 32.0 | 3.20e-01 | 81.2% | 59.5% |
D2
medium
residues 195-224_248-271