hypothetical_protein_pneo_cds_840

Euk-Vir

Pandoravirus_neocaledonia

hypothetical_protein_pneo_cds_840__YP_009482450__Pandoravirus_neocaledonia__2107708

Identity

74.4 mean pLDDT

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

View cluster (28 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 48-193

PDB

Domain cluster: rep: hypothetical_protein_pdul_cds_547__YP_008319327__Pandoravirus_dulcis__1349409__D55-272

D2 medium residues 194-258

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6jlzA01	1.20.120.1070	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain	0.59	49.0	4.18e-01	93.8%	90.7%
4g1tA02	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.54	39.0	4.07e-01	81.5%	93.4%
3fnbA01	1.20.1440.110	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase	0.53	44.0	3.76e-01	96.9%	75.4%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3993765	627.1.1.0 ↗	alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain	0.63	43.0	4.04e-01	72.3%	78.8%
3602354	1030.1.1.1 ↗	alpha duplicates or obligate multimers › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Csm2_III-A	0.61	42.0	3.53e-01	73.8%	65.0%
3730579	109.4.1.1585 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_IPO9_c	0.60	48.0	3.25e-01	90.8%	51.3%
3699854	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.59	50.0	4.26e-01	100.0%	81.7%
5074726	633.10.1.0 ↗	alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like	0.51	35.0	3.27e-01	81.5%	55.3%