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hypothetical_protein_pneo_cds_851

Euk-Vir

Pandoravirus_neocaledonia

hypothetical_protein_pneo_cds_851__YP_009482461__Pandoravirus_neocaledonia__2107708

Identity

Accession:
YP_009482461 ↗
Protein ID:
hypothetical_protein_pneo_cds_851
Kingdom:
euk

Quality

67.4 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 90-221
PDB
Domain cluster: rep: hypothetical_protein_LAU_0156__YP_004347119__Lausannevirus__999883__D6-130
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19083.6 best DUF5774 98.7 3.80e-28 97.7% 80.5%
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bwfA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.71 42.0 5.32e-01 70.5% 100.0%
2dziA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.69 42.0 5.20e-01 74.2% 100.0%
1v86A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.68 42.0 4.86e-01 73.5% 85.3%
1t0yA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.68 44.0 5.17e-01 70.5% 95.6%
1wx8A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.68 43.0 4.96e-01 76.5% 87.5%
2kc1A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.68 46.0 5.33e-01 76.5% 98.9%
1v5tA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.68 43.0 5.11e-01 86.4% 94.4%
5ip4E00 3.10.20.230 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Doublecortin domain 0.67 42.0 5.11e-01 70.5% 98.8%
4efoA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.67 43.0 5.10e-01 76.5% 96.6%
2kmcA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.66 44.0 4.90e-01 70.5% 86.3%
1wgdA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.66 42.0 4.92e-01 70.5% 91.4%
2c7hA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.63 40.0 4.68e-01 84.8% 95.3%
1se9A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.63 46.0 5.17e-01 75.0% 98.0%
1ryjA00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.63 35.0 4.47e-01 70.5% 100.0%
1oeyL00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 41.0 4.67e-01 79.5% 90.8%
3w1yB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 46.0 5.05e-01 98.5% 98.1%
3ddcB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.59 47.0 4.78e-01 85.6% 88.7%
1wf9A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 41.0 4.44e-01 80.3% 90.7%
2z8lA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.56 39.0 4.15e-01 71.2% 89.7%
5dm6S01 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.50 31.0 3.71e-01 98.5% 95.3%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3716138 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.75 48.0 5.81e-01 75.0% 100.0%
3607467 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.74 47.0 5.53e-01 74.2% 93.3%
3456623 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.73 44.0 5.32e-01 70.5% 91.8%
3332203 221.1.1.2 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.72 45.0 5.32e-01 72.0% 91.1%
3553026 221.1.1.4 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 0.72 47.0 5.44e-01 71.2% 91.6%
3205355 221.1.1.7 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX 0.72 46.0 5.54e-01 75.8% 100.0%
3705388 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.71 51.0 5.81e-01 75.8% 99.0%
3596763 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.71 52.0 5.64e-01 78.8% 91.7%
3794803 221.1.1.153 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_PRKD1_N 0.71 48.0 5.60e-01 70.5% 95.8%
4011466 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.71 47.0 5.49e-01 77.3% 97.8%
3546629 221.1.1.156 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_IARS1 0.69 43.0 5.00e-01 85.6% 86.3%
3527416 221.1.1.52 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 0.69 45.0 5.17e-01 70.5% 91.5%
3755617 221.1.1.2 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.69 42.0 4.50e-01 72.0% 70.2%
3266778 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.69 43.0 5.16e-01 78.8% 97.6%
3726023 221.1.1.7 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX 0.69 50.0 5.62e-01 98.5% 100.0%
3786778 221.1.1.68 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ATG5_UblA 0.69 48.0 4.86e-01 71.2% 93.1%
3534015 221.1.1.168 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd, PI3K_p85B 0.68 48.0 3.62e-01 71.2% 33.0%
3404934 221.1.1.52 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 0.68 45.0 5.20e-01 70.5% 93.6%
3935257 221.1.1.168 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd, PI3K_p85B 0.67 47.0 3.50e-01 71.2% 37.2%
3605761 221.1.1.4 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 0.67 48.0 5.18e-01 74.2% 92.7%
3585365 221.1.1.168 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd, PI3K_p85B 0.67 46.0 3.49e-01 71.2% 36.1%
3993658 221.1.1.170 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBL_ZFAND1 0.66 49.0 5.43e-01 94.7% 97.1%
3992275 221.1.1.11 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_p85B 0.66 46.0 3.42e-01 71.2% 38.2%
3479436 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.66 46.0 5.19e-01 71.2% 100.0%
4430908 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.65 40.0 4.47e-01 70.5% 78.1%
3740157 221.1.1.68 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ATG5_UblA 0.65 45.0 4.96e-01 70.5% 90.5%
3601115 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.64 47.0 5.27e-01 79.5% 100.0%
3663256 221.1.1.4 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 0.64 45.0 4.68e-01 72.0% 83.3%
3275839 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.63 41.0 4.75e-01 73.5% 91.6%
3708462 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.61 45.0 3.85e-01 76.5% 56.2%
3707909 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.61 40.0 4.60e-01 84.8% 95.6%
3462768 221.1.1.2 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.60 43.0 4.65e-01 87.1% 86.1%
4024438 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.59 44.0 4.63e-01 80.3% 85.0%
4049575 239.1.1.6 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 0.54 28.0 3.51e-01 75.8% 87.1%
3766625 221.1.1.1 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Fer2 0.52 37.0 4.08e-01 72.7% 95.0%